This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2g2c

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:38, 3 March 2021) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2g2c.gif|left|200px]]
 
-
<!--
+
==Putative molybdenum cofactor biosynthesis protein from Corynebacterium diphtheriae.==
-
The line below this paragraph, containing "STRUCTURE_2g2c", creates the "Structure Box" on the page.
+
<StructureSection load='2g2c' size='340' side='right'caption='[[2g2c]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2g2c]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_diphtheriae"_kruse_in_flugge_1886 "bacillus diphtheriae" kruse in flugge 1886]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G2C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2G2C FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
-->
+
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_2g2c| PDB=2g2c | SCENE= }}
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">DIP0503 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1717 "Bacillus diphtheriae" Kruse in Flugge 1886])</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2g2c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g2c OCA], [https://pdbe.org/2g2c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2g2c RCSB], [https://www.ebi.ac.uk/pdbsum/2g2c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2g2c ProSAT], [https://www.topsan.org/Proteins/MCSG/2g2c TOPSAN]</span></td></tr>
-
'''Putative molybdenum cofactor biosynthesis protein from Corynebacterium diphtheriae.'''
+
</table>
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
2G2C is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Corynebacterium_diphtheriae Corynebacterium diphtheriae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G2C OCA].
+
<jmolCheckbox>
-
[[Category: Corynebacterium diphtheriae]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g2/2g2c_consurf.spt"</scriptWhenChecked>
-
[[Category: Single protein]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Clancy, S.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Joachimiak, A.]]
+
</jmolCheckbox>
-
[[Category: Li, H.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2g2c ConSurf].
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
<div style="clear:both"></div>
-
[[Category: Osipiuk, J.]]
+
__TOC__
 +
</StructureSection>
 +
[[Category: Bacillus diphtheriae kruse in flugge 1886]]
 +
[[Category: Large Structures]]
 +
[[Category: Clancy, S]]
 +
[[Category: Joachimiak, A]]
 +
[[Category: Li, H]]
 +
[[Category: Structural genomic]]
 +
[[Category: Osipiuk, J]]
[[Category: Mcsg]]
[[Category: Mcsg]]
-
[[Category: Midwest center for structural genomic]]
+
[[Category: PSI, Protein structure initiative]]
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
[[Category: Putative molybdenum cofactor biosynthesis protein]]
[[Category: Putative molybdenum cofactor biosynthesis protein]]
-
[[Category: Structural genomic]]
+
[[Category: Unknown function]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 04:36:50 2008''
+

Current revision

Putative molybdenum cofactor biosynthesis protein from Corynebacterium diphtheriae.

PDB ID 2g2c

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools