This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2g7u

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (18:51, 10 March 2021) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2g7u.png|left|200px]]
 
-
<!--
+
==2.3 A structure of putative catechol degradative operon regulator from Rhodococcus sp. RHA1==
-
The line below this paragraph, containing "STRUCTURE_2g7u", creates the "Structure Box" on the page.
+
<StructureSection load='2g7u' size='340' side='right'caption='[[2g7u]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2g7u]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhojr Rhojr]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G7U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2G7U FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
-->
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RHA05304 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=101510 RHOJR])</td></tr>
-
{{STRUCTURE_2g7u| PDB=2g7u | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2g7u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g7u OCA], [https://pdbe.org/2g7u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2g7u RCSB], [https://www.ebi.ac.uk/pdbsum/2g7u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2g7u ProSAT], [https://www.topsan.org/Proteins/MCSG/2g7u TOPSAN]</span></td></tr>
-
 
+
</table>
-
===2.3 A structure of putative catechol degradative operon regulator from Rhodococcus sp. RHA1===
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
==About this Structure==
+
<jmolCheckbox>
-
[[2g7u]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodococcus_sp. Rhodococcus sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G7U OCA].
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g7/2g7u_consurf.spt"</scriptWhenChecked>
-
[[Category: Rhodococcus sp.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Chruszcz, M.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Cymborowski, M.]]
+
</jmolCheckbox>
-
[[Category: Edwards, A.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2g7u ConSurf].
-
[[Category: Grabowski, M.]]
+
<div style="clear:both"></div>
-
[[Category: Joachimiak, A.]]
+
__TOC__
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
</StructureSection>
-
[[Category: Minor, W.]]
+
[[Category: Large Structures]]
-
[[Category: Onopriyenko, O.]]
+
[[Category: Rhojr]]
-
[[Category: Savchenko, A.]]
+
[[Category: Chruszcz, M]]
-
[[Category: Skarina, T.]]
+
[[Category: Cymborowski, M]]
-
[[Category: Zheng, H.]]
+
[[Category: Edwards, A]]
 +
[[Category: Grabowski, M]]
 +
[[Category: Joachimiak, A]]
 +
[[Category: Structural genomic]]
 +
[[Category: Minor, W]]
 +
[[Category: Onopriyenko, O]]
 +
[[Category: Savchenko, A]]
 +
[[Category: Skarina, T]]
 +
[[Category: Zheng, H]]
[[Category: Iclr family]]
[[Category: Iclr family]]
[[Category: Mcsg]]
[[Category: Mcsg]]
-
[[Category: Midwest center for structural genomic]]
+
[[Category: PSI, Protein structure initiative]]
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
-
[[Category: Structural genomic]]
+
[[Category: Transcriptional regulator]]
[[Category: Transcriptional regulator]]
[[Category: Unknown function]]
[[Category: Unknown function]]

Current revision

2.3 A structure of putative catechol degradative operon regulator from Rhodococcus sp. RHA1

PDB ID 2g7u

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2g7u"
Personal tools