This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2gax
From Proteopedia
(Difference between revisions)
| (13 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2gax.gif|left|200px]]<br /><applet load="2gax" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2gax, resolution 1.801Å" /> | ||
| - | '''Structure of Protein of Unknown Function Atu0240 from Agrobacteriium tumerfaciencs str. C58'''<br /> | ||
| - | == | + | ==Structure of Protein of Unknown Function Atu0240 from Agrobacteriium tumerfaciencs str. C58== |
| - | + | <StructureSection load='2gax' size='340' side='right'caption='[[2gax]], [[Resolution|resolution]] 1.80Å' scene=''> | |
| - | [[ | + | == Structural highlights == |
| - | [ | + | <table><tr><td colspan='2'>[[2gax]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrt5 Agrt5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GAX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GAX FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> |
| - | [ | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | [[Category: | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">atu0240 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 AGRT5])</td></tr> |
| - | [[Category: | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gax FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gax OCA], [https://pdbe.org/2gax PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gax RCSB], [https://www.ebi.ac.uk/pdbsum/2gax PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gax ProSAT], [https://www.topsan.org/Proteins/MCSG/2gax TOPSAN]</span></td></tr> |
| - | [[Category: | + | </table> |
| - | [[Category: | + | == Evolutionary Conservation == |
| - | [[Category: | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[Category: | + | Check<jmol> |
| - | [[Category: | + | <jmolCheckbox> |
| - | [[Category: | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ga/2gax_consurf.spt"</scriptWhenChecked> |
| - | [[Category: | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: protein | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: | + | </jmolCheckbox> |
| - | [[Category: | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gax ConSurf]. |
| - | + | <div style="clear:both"></div> | |
| - | + | __TOC__ | |
| + | </StructureSection> | ||
| + | [[Category: Agrt5]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Binkowski, T A]] | ||
| + | [[Category: Edwards, A]] | ||
| + | [[Category: Evdokimova, E]] | ||
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Kudritska, M]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Agrobacterium tumfacien]] | ||
| + | [[Category: Hypothetical protein]] | ||
| + | [[Category: Mcsg]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
| + | [[Category: Unknown function]] | ||
Current revision
Structure of Protein of Unknown Function Atu0240 from Agrobacteriium tumerfaciencs str. C58
| |||||||||||
