This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2gsl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (19:16, 10 March 2021) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2gsl.gif|left|200px]]
 
-
{{Structure
+
==X-Ray Crystal Structure of Protein FN1578 from Fusobacterium nucleatum. Northeast Structural Genomics Consortium Target NR1.==
-
|PDB= 2gsl |SIZE=350|CAPTION= <scene name='initialview01'>2gsl</scene>, resolution 2.60&Aring;
+
<StructureSection load='2gsl' size='340' side='right'caption='[[2gsl]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=MG:MAGNESIUM ION'>MG</scene>
+
<table><tr><td colspan='2'>[[2gsl]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Fusnn Fusnn]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GSL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GSL FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
|GENE= FN1578 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=190304 Fusobacterium nucleatum subsp. nucleatum ATCC 25586])
+
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
}}
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">FN1578 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=190304 FUSNN])</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gsl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gsl OCA], [https://pdbe.org/2gsl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gsl RCSB], [https://www.ebi.ac.uk/pdbsum/2gsl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gsl ProSAT], [https://www.topsan.org/Proteins/NESGC/2gsl TOPSAN]</span></td></tr>
-
'''X-Ray Crystal Structure of Protein FN1578 from Fusobacterium nucleatum. Northeast Structural Genomics Consortium Target NR1.'''
+
</table>
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
2GSL is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Fusobacterium_nucleatum_subsp._nucleatum_atcc_25586 Fusobacterium nucleatum subsp. nucleatum atcc 25586]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GSL OCA].
+
<jmolCheckbox>
-
[[Category: Fusobacterium nucleatum subsp. nucleatum atcc 25586]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gs/2gsl_consurf.spt"</scriptWhenChecked>
-
[[Category: Single protein]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Acton, T B.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Conover, K.]]
+
</jmolCheckbox>
-
[[Category: Forouhar, F.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gsl ConSurf].
-
[[Category: Hunt, J F.]]
+
<div style="clear:both"></div>
-
[[Category: Janjua, H.]]
+
__TOC__
-
[[Category: Jayaraman, S.]]
+
</StructureSection>
-
[[Category: Montelione, G T.]]
+
[[Category: Fusnn]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Large Structures]]
-
[[Category: Su, Min]]
+
[[Category: Acton, T B]]
-
[[Category: Tong, L.]]
+
[[Category: Conover, K]]
-
[[Category: Xiao, R.]]
+
[[Category: Forouhar, F]]
-
[[Category: MG]]
+
[[Category: Hunt, J F]]
-
[[Category: alpha-helical protein]]
+
[[Category: Janjua, H]]
-
[[Category: nesg]]
+
[[Category: Jayaraman, S]]
-
[[Category: northeast structural genomics consortium]]
+
[[Category: Montelione, G T]]
-
[[Category: protein structure initiative]]
+
[[Category: Structural genomic]]
-
[[Category: psi]]
+
[[Category: Su, M]]
-
[[Category: structural genomic]]
+
[[Category: Tong, L]]
-
 
+
[[Category: Xiao, R]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 17:08:35 2008''
+
[[Category: Alpha-helical protein]]
 +
[[Category: Nesg]]
 +
[[Category: PSI, Protein structure initiative]]
 +
[[Category: Unknown function]]

Current revision

X-Ray Crystal Structure of Protein FN1578 from Fusobacterium nucleatum. Northeast Structural Genomics Consortium Target NR1.

PDB ID 2gsl

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2gsl"
Personal tools