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2gta
From Proteopedia
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| - | [[Image:2gta.gif|left|200px]]<br /><applet load="2gta" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2gta, resolution 2.90Å" /> | ||
| - | '''Crystal Structure of the putative pyrophosphatase YPJD from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR428.'''<br /> | ||
| - | == | + | ==Crystal Structure of the putative pyrophosphatase YPJD from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR428.== |
| - | + | <StructureSection load='2gta' size='340' side='right'caption='[[2gta]], [[Resolution|resolution]] 2.90Å' scene=''> | |
| - | [[Category: Bacillus | + | == Structural highlights == |
| - | [[Category: | + | <table><tr><td colspan='2'>[[2gta]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_globigii"_migula_1900 "bacillus globigii" migula 1900]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GTA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GTA FirstGlance]. <br> |
| - | [[Category: Acton, T | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> |
| - | [[Category: Hunt, J F | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | [[Category: Ma, L C | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ypjD ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Bacillus globigii" Migula 1900])</td></tr> |
| - | [[Category: Montelione, G T | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gta FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gta OCA], [https://pdbe.org/2gta PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gta RCSB], [https://www.ebi.ac.uk/pdbsum/2gta PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gta ProSAT], [https://www.topsan.org/Proteins/NESGC/2gta TOPSAN]</span></td></tr> |
| - | [[Category: | + | </table> |
| - | [[Category: Seetharaman, J | + | == Evolutionary Conservation == |
| - | [[Category: Tong, L | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[Category: Vorobiev, S M | + | Check<jmol> |
| - | [[Category: Wang, D | + | <jmolCheckbox> |
| - | [[Category: Xio, R | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gt/2gta_consurf.spt"</scriptWhenChecked> |
| - | [[Category: Zhou, W | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: | + | </jmolCheckbox> |
| - | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gta ConSurf]. | |
| - | + | <div style="clear:both"></div> | |
| - | [[Category: | + | __TOC__ |
| - | [[Category: | + | </StructureSection> |
| - | [[Category: | + | [[Category: Bacillus globigii migula 1900]] |
| - | + | [[Category: Large Structures]] | |
| - | + | [[Category: Acton, T]] | |
| - | + | [[Category: Hunt, J F]] | |
| + | [[Category: Ma, L C]] | ||
| + | [[Category: Montelione, G T]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Seetharaman, J]] | ||
| + | [[Category: Tong, L]] | ||
| + | [[Category: Vorobiev, S M]] | ||
| + | [[Category: Wang, D]] | ||
| + | [[Category: Xio, R]] | ||
| + | [[Category: Zhou, W]] | ||
| + | [[Category: Nesg]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
| + | [[Category: Pyrophosphatase]] | ||
| + | [[Category: Unknown function]] | ||
| + | [[Category: Ypjd]] | ||
Current revision
Crystal Structure of the putative pyrophosphatase YPJD from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR428.
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