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2gta

From Proteopedia

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[[Image:2gta.gif|left|200px]]
 
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{{Structure
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==Crystal Structure of the putative pyrophosphatase YPJD from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR428.==
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|PDB= 2gta |SIZE=350|CAPTION= <scene name='initialview01'>2gta</scene>, resolution 2.90&Aring;
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<StructureSection load='2gta' size='340' side='right'caption='[[2gta]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>
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<table><tr><td colspan='2'>[[2gta]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_globigii"_migula_1900 "bacillus globigii" migula 1900]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GTA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GTA FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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|GENE= ypjD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 Bacillus subtilis])
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1694 MazG]</span>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ypjD ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Bacillus globigii" Migula 1900])</td></tr>
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|RELATEDENTRY=
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gta FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gta OCA], [https://pdbe.org/2gta PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gta RCSB], [https://www.ebi.ac.uk/pdbsum/2gta PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gta ProSAT], [https://www.topsan.org/Proteins/NESGC/2gta TOPSAN]</span></td></tr>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gta FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gta OCA], [http://www.ebi.ac.uk/pdbsum/2gta PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2gta RCSB]</span>
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</table>
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}}
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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'''Crystal Structure of the putative pyrophosphatase YPJD from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR428.'''
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gt/2gta_consurf.spt"</scriptWhenChecked>
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==About this Structure==
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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2GTA is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GTA OCA].
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Bacillus subtilis]]
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</jmolCheckbox>
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[[Category: Single protein]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gta ConSurf].
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[[Category: Acton, T.]]
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<div style="clear:both"></div>
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[[Category: Hunt, J F.]]
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__TOC__
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[[Category: Ma, L C.]]
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</StructureSection>
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[[Category: Montelione, G T.]]
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[[Category: Bacillus globigii migula 1900]]
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[[Category: NESG, Northeast Structural Genomics Consortium.]]
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[[Category: Large Structures]]
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[[Category: Seetharaman, J.]]
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[[Category: Acton, T]]
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[[Category: Tong, L.]]
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[[Category: Hunt, J F]]
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[[Category: Vorobiev, S M.]]
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[[Category: Ma, L C]]
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[[Category: Wang, D.]]
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[[Category: Montelione, G T]]
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[[Category: Xio, R.]]
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[[Category: Structural genomic]]
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[[Category: Zhou, W.]]
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[[Category: Seetharaman, J]]
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[[Category: nesg]]
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[[Category: Tong, L]]
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[[Category: northeast structural genomics consortium]]
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[[Category: Vorobiev, S M]]
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[[Category: protein structure initiative]]
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[[Category: Wang, D]]
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[[Category: psi]]
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[[Category: Xio, R]]
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[[Category: pyrophosphatase]]
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[[Category: Zhou, W]]
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[[Category: structural genomic]]
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[[Category: Nesg]]
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[[Category: ypjd]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: Pyrophosphatase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:21:21 2008''
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[[Category: Unknown function]]
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[[Category: Ypjd]]

Current revision

Crystal Structure of the putative pyrophosphatase YPJD from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR428.

PDB ID 2gta

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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