2gwn

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(New page: 200px<br /><applet load="2gwn" size="350" color="white" frame="true" align="right" spinBox="true" caption="2gwn, resolution 1.85&Aring;" /> '''The structure of put...)
Current revision (07:26, 17 March 2021) (edit) (undo)
 
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[[Image:2gwn.gif|left|200px]]<br /><applet load="2gwn" size="350" color="white" frame="true" align="right" spinBox="true"
 
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caption="2gwn, resolution 1.85&Aring;" />
 
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'''The structure of putative dihydroorotase from Porphyromonas gingivalis.'''<br />
 
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==About this Structure==
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==The structure of putative dihydroorotase from Porphyromonas gingivalis.==
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2GWN is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Porphyromonas_gingivalis Porphyromonas gingivalis] with <scene name='pdbligand=ZN:'>ZN</scene>, <scene name='pdbligand=CAC:'>CAC</scene>, <scene name='pdbligand=CL:'>CL</scene>, <scene name='pdbligand=SO4:'>SO4</scene>, <scene name='pdbligand=BME:'>BME</scene> and <scene name='pdbligand=GOL:'>GOL</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GWN OCA].
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<StructureSection load='2gwn' size='340' side='right'caption='[[2gwn]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
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[[Category: Porphyromonas gingivalis]]
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== Structural highlights ==
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[[Category: Single protein]]
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<table><tr><td colspan='2'>[[2gwn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Porgi Porgi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GWN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GWN FirstGlance]. <br>
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[[Category: Borovilos, M.]]
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene>, <scene name='pdbligand=CAC:CACODYLATE+ION'>CAC</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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[[Category: Cuff, M.E.]]
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=KCX:LYSINE+NZ-CARBOXYLIC+ACID'>KCX</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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[[Category: Joachimiak, A.]]
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">pyrC ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=242619 PORGI])</td></tr>
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[[Category: MCSG, Midwest.Center.for.Structural.Genomics.]]
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gwn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gwn OCA], [https://pdbe.org/2gwn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gwn RCSB], [https://www.ebi.ac.uk/pdbsum/2gwn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gwn ProSAT], [https://www.topsan.org/Proteins/MCSG/2gwn TOPSAN]</span></td></tr>
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[[Category: Moy, S.]]
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</table>
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[[Category: BME]]
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== Evolutionary Conservation ==
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[[Category: CAC]]
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[[Image:Consurf_key_small.gif|200px|right]]
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[[Category: CL]]
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Check<jmol>
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[[Category: GOL]]
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<jmolCheckbox>
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[[Category: SO4]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gw/2gwn_consurf.spt"</scriptWhenChecked>
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[[Category: ZN]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: dihydroorotase]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: mcsg]]
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</jmolCheckbox>
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[[Category: midwest center for structural genomics]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gwn ConSurf].
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[[Category: porphyromonas gingivalis]]
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<div style="clear:both"></div>
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[[Category: protein structure initiative]]
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__TOC__
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[[Category: psi]]
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</StructureSection>
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[[Category: structural genomics]]
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[[Category: Large Structures]]
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[[Category: zinc-binding protein]]
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[[Category: Porgi]]
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[[Category: Borovilos, M]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 20:09:52 2008''
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[[Category: Cuff, M E]]
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[[Category: Joachimiak, A]]
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[[Category: Structural genomic]]
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[[Category: Moy, S]]
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[[Category: Dihydroorotase]]
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[[Category: Mcsg]]
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[[Category: Porphyromonas gingivali]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: Unknown function]]
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[[Category: Zinc-binding protein]]

Current revision

The structure of putative dihydroorotase from Porphyromonas gingivalis.

PDB ID 2gwn

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