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2gzx
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==Crystal Structure of the TatD deoxyribonuclease MW0446 from Staphylococcus aureus. Northeast Structural Genomics Consortium Target ZR237.== | ==Crystal Structure of the TatD deoxyribonuclease MW0446 from Staphylococcus aureus. Northeast Structural Genomics Consortium Target ZR237.== | ||
| - | <StructureSection load='2gzx' size='340' side='right' caption='[[2gzx]], [[Resolution|resolution]] 2.20Å' scene=''> | + | <StructureSection load='2gzx' size='340' side='right'caption='[[2gzx]], [[Resolution|resolution]] 2.20Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2gzx]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2gzx]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Staaw Staaw]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GZX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GZX FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>< | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MW0446 ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MW0446 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=196620 STAAW])</td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gzx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gzx OCA], [https://pdbe.org/2gzx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gzx RCSB], [https://www.ebi.ac.uk/pdbsum/2gzx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gzx ProSAT], [https://www.topsan.org/Proteins/NESGC/2gzx TOPSAN]</span></td></tr> |
| - | <table> | + | </table> |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gz/2gzx_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gz/2gzx_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gzx ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Acton, T | + | [[Category: Staaw]] |
| - | [[Category: Fang, Y | + | [[Category: Acton, T]] |
| - | [[Category: Hunt, J F | + | [[Category: Fang, Y]] |
| - | [[Category: Montelione, G T | + | [[Category: Hunt, J F]] |
| - | [[Category: | + | [[Category: Montelione, G T]] |
| - | [[Category: Neely, H | + | [[Category: Structural genomic]] |
| - | [[Category: Seetharaman, J | + | [[Category: Neely, H]] |
| - | [[Category: Tong, L | + | [[Category: Seetharaman, J]] |
| - | [[Category: Vorobiev, S M | + | [[Category: Tong, L]] |
| - | [[Category: Wang, D | + | [[Category: Vorobiev, S M]] |
| - | [[Category: Xiao, R | + | [[Category: Wang, D]] |
| + | [[Category: Xiao, R]] | ||
[[Category: Deoxyribonuclease]] | [[Category: Deoxyribonuclease]] | ||
[[Category: Dnase]] | [[Category: Dnase]] | ||
[[Category: Nesg]] | [[Category: Nesg]] | ||
| - | [[Category: | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
| - | + | ||
| - | + | ||
[[Category: Tatd]] | [[Category: Tatd]] | ||
[[Category: Unknown function]] | [[Category: Unknown function]] | ||
[[Category: Zr237]] | [[Category: Zr237]] | ||
Current revision
Crystal Structure of the TatD deoxyribonuclease MW0446 from Staphylococcus aureus. Northeast Structural Genomics Consortium Target ZR237.
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Categories: Large Structures | Staaw | Acton, T | Fang, Y | Hunt, J F | Montelione, G T | Structural genomic | Neely, H | Seetharaman, J | Tong, L | Vorobiev, S M | Wang, D | Xiao, R | Deoxyribonuclease | Dnase | Nesg | PSI, Protein structure initiative | Tatd | Unknown function | Zr237
