This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3kic

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
{{Large structure}}
+
 
==Crystal structure of adeno-associated virus serotype 3B==
==Crystal structure of adeno-associated virus serotype 3B==
-
<StructureSection load='3kic' size='340' side='right' caption='[[3kic]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
+
<StructureSection load='3kic' size='340' side='right'caption='[[3kic]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3kic]] is a 20 chain structure with sequence from [http://en.wikipedia.org/wiki/Adeno-associated_virus_3b Adeno-associated virus 3b]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KIC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KIC FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3kic]] is a 20 chain structure with sequence from [https://en.wikipedia.org/wiki/Adeno-associated_virus_3b Adeno-associated virus 3b]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KIC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KIC FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=D5M:2-DEOXYADENOSINE-5-MONOPHOSPHATE'>D5M</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=D5M:2-DEOXYADENOSINE-5-MONOPHOSPHATE'>D5M</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3kie|3kie]]</td></tr>
+
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3kie|3kie]]</div></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Cap ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=68742 Adeno-associated virus 3B])</td></tr>
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Cap ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=68742 Adeno-associated virus 3B])</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3kic FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kic OCA], [http://pdbe.org/3kic PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3kic RCSB], [http://www.ebi.ac.uk/pdbsum/3kic PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3kic ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3kic FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kic OCA], [https://pdbe.org/3kic PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3kic RCSB], [https://www.ebi.ac.uk/pdbsum/3kic PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3kic ProSAT]</span></td></tr>
</table>
</table>
-
{{Large structure}}
 
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ki/3kic_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ki/3kic_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 29: Line 28:
</div>
</div>
<div class="pdbe-citations 3kic" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 3kic" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
== References ==
== References ==
<references/>
<references/>
Line 34: Line 36:
</StructureSection>
</StructureSection>
[[Category: Adeno-associated virus 3b]]
[[Category: Adeno-associated virus 3b]]
 +
[[Category: Large Structures]]
[[Category: Chapman, M S]]
[[Category: Chapman, M S]]
[[Category: Lerch, T F]]
[[Category: Lerch, T F]]

Revision as of 10:36, 31 March 2021

Crystal structure of adeno-associated virus serotype 3B

PDB ID 3kic

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3kic"
Personal tools