This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2iaf
From Proteopedia
(Difference between revisions)
| (12 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2iaf.gif|left|200px]]<br /><applet load="2iaf" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2iaf, resolution 2.05Å" /> | ||
| - | '''Crystal structure of a fragment (residues 11 to 161) of L-serine dehydratase from Legionella pneumophila'''<br /> | ||
| - | == | + | ==Crystal structure of a fragment (residues 11 to 161) of L-serine dehydratase from Legionella pneumophila== |
| - | + | <StructureSection load='2iaf' size='340' side='right'caption='[[2iaf]], [[Resolution|resolution]] 2.05Å' scene=''> | |
| - | [[ | + | == Structural highlights == |
| - | [ | + | <table><tr><td colspan='2'>[[2iaf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_33152 Atcc 33152]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IAF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IAF FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> |
| - | [ | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | [[Category: | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">sdhL ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=446 ATCC 33152])</td></tr> |
| - | [[Category: | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2iaf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2iaf OCA], [https://pdbe.org/2iaf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2iaf RCSB], [https://www.ebi.ac.uk/pdbsum/2iaf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2iaf ProSAT], [https://www.topsan.org/Proteins/MCSG/2iaf TOPSAN]</span></td></tr> |
| - | [[Category: | + | </table> |
| - | [[Category: | + | == Evolutionary Conservation == |
| - | [[Category: | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[Category: | + | Check<jmol> |
| - | [[Category: | + | <jmolCheckbox> |
| - | [[Category: | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ia/2iaf_consurf.spt"</scriptWhenChecked> |
| - | [[Category: | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: | + | </jmolCheckbox> |
| - | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2iaf ConSurf]. | |
| - | + | <div style="clear:both"></div> | |
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Atcc 33152]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Moy, S]] | ||
| + | [[Category: Mulligan, R]] | ||
| + | [[Category: Nocek, B]] | ||
| + | [[Category: L-serine dehydratase]] | ||
| + | [[Category: Mad]] | ||
| + | [[Category: Mcsg]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
| + | [[Category: Unknown function]] | ||
Current revision
Crystal structure of a fragment (residues 11 to 161) of L-serine dehydratase from Legionella pneumophila
| |||||||||||

