This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2icu
From Proteopedia
(Difference between revisions)
| (13 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2icu.gif|left|200px]] | ||
| - | + | ==Crystal Structure of Hypothetical Protein YedK From Escherichia coli== | |
| - | + | <StructureSection load='2icu' size='340' side='right'caption='[[2icu]], [[Resolution|resolution]] 1.60Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2icu]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Ecoli Ecoli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ICU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ICU FirstGlance]. <br> | |
| - | | | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | | | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yedK ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr> |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2icu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2icu OCA], [https://pdbe.org/2icu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2icu RCSB], [https://www.ebi.ac.uk/pdbsum/2icu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2icu ProSAT], [https://www.topsan.org/Proteins/SECSG/2icu TOPSAN]</span></td></tr> | |
| - | + | </table> | |
| - | ''' | + | == Evolutionary Conservation == |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | + | Check<jmol> | |
| - | == | + | <jmolCheckbox> |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ic/2icu_consurf.spt"</scriptWhenChecked> | |
| - | [[Category: | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: Chen, L | + | </jmolCheckbox> |
| - | [[Category: Ebihara, A | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2icu ConSurf]. |
| - | [[Category: | + | <div style="clear:both"></div> |
| - | [[Category: Li, Y | + | __TOC__ |
| - | [[Category: Liu, Z J | + | </StructureSection> |
| - | + | [[Category: Ecoli]] | |
| - | [[Category: Rose, J | + | [[Category: Large Structures]] |
| - | + | [[Category: Chen, L]] | |
| - | [[Category: Wang, B C | + | [[Category: Ebihara, A]] |
| - | [[Category: Yokoyama, S | + | [[Category: Structural genomic]] |
| - | [[Category: Zhao, M | + | [[Category: Li, Y]] |
| - | [[Category: | + | [[Category: Liu, Z J]] |
| - | [[Category: | + | [[Category: Rose, J]] |
| - | [[Category: | + | [[Category: Wang, B C]] |
| - | [[Category: | + | [[Category: Yokoyama, S]] |
| - | [[Category: | + | [[Category: Zhao, M]] |
| - | [[Category: | + | [[Category: Hypothetical protein yedk]] |
| - | + | [[Category: PSI, Protein structure initiative]] | |
| - | + | [[Category: Riken]] | |
| - | + | [[Category: Rsgi]] | |
| - | + | [[Category: Secsg]] | |
| - | + | [[Category: Unknown function]] | |
Current revision
Crystal Structure of Hypothetical Protein YedK From Escherichia coli
| |||||||||||
