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2id1

From Proteopedia

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[[Image:2id1.gif|left|200px]]
 
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==X-Ray Crystal Structure of Protein CV0518 from Chromobacterium violaceum, Northeast Structural Genomics Consortium Target CvR5.==
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The line below this paragraph, containing "STRUCTURE_2id1", creates the "Structure Box" on the page.
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<StructureSection load='2id1' size='340' side='right'caption='[[2id1]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2id1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Chrvo Chrvo]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ID1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ID1 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene></td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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{{STRUCTURE_2id1| PDB=2id1 | SCENE= }}
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CV_0518 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243365 CHRVO])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2id1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2id1 OCA], [https://pdbe.org/2id1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2id1 RCSB], [https://www.ebi.ac.uk/pdbsum/2id1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2id1 ProSAT], [https://www.topsan.org/Proteins/NESGC/2id1 TOPSAN]</span></td></tr>
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'''X-Ray Crystal Structure of Protein CV0518 from Chromobacterium violaceum, Northeast Structural Genomics Consortium Target CvR5.'''
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</table>
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== Function ==
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[[https://www.uniprot.org/uniprot/IOJAP_CHRVO IOJAP_CHRVO]] Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.[HAMAP-Rule:MF_01477]
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==About this Structure==
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== Evolutionary Conservation ==
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2ID1 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Chromobacterium_violaceum Chromobacterium violaceum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ID1 OCA].
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[[Image:Consurf_key_small.gif|200px|right]]
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[[Category: Chromobacterium violaceum]]
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Check<jmol>
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[[Category: Single protein]]
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<jmolCheckbox>
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[[Category: Acton, T B.]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/id/2id1_consurf.spt"</scriptWhenChecked>
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[[Category: Baran, M.]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: Cunningham, K.]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Forouhar, F.]]
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</jmolCheckbox>
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[[Category: Ho, C K.]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2id1 ConSurf].
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[[Category: Hunt, J F.]]
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<div style="clear:both"></div>
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[[Category: Janjua, H.]]
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__TOC__
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[[Category: Liu, J.]]
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</StructureSection>
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[[Category: Ma, L C.]]
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[[Category: Chrvo]]
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[[Category: Montelione, G T.]]
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[[Category: Large Structures]]
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[[Category: NESG, Northeast Structural Genomics Consortium.]]
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[[Category: Acton, T B]]
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[[Category: Rost, B.]]
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[[Category: Baran, M]]
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[[Category: Seetharaman, J.]]
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[[Category: Cunningham, K]]
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[[Category: Tong, L.]]
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[[Category: Forouhar, F]]
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[[Category: Xiao, R.]]
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[[Category: Ho, C K]]
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[[Category: Zhou, W.]]
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[[Category: Hunt, J F]]
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[[Category: Janjua, H]]
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[[Category: Liu, J]]
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[[Category: Ma, L C]]
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[[Category: Montelione, G T]]
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[[Category: Structural genomic]]
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[[Category: Rost, B]]
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[[Category: Seetharaman, J]]
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[[Category: Tong, L]]
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[[Category: Xiao, R]]
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[[Category: Zhou, W]]
[[Category: Alpha-beta protein]]
[[Category: Alpha-beta protein]]
[[Category: Nesg]]
[[Category: Nesg]]
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[[Category: Northeast structural genomics consortium]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: Protein structure initiative]]
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[[Category: Unknown function]]
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[[Category: Psi-2]]
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[[Category: Structural genomic]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 07:21:07 2008''
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Current revision

X-Ray Crystal Structure of Protein CV0518 from Chromobacterium violaceum, Northeast Structural Genomics Consortium Target CvR5.

PDB ID 2id1

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