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2kek
From Proteopedia
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==Solution structure of a dimer of LAC repressor DNA-binding domain complexed to its natural operator O3== | ==Solution structure of a dimer of LAC repressor DNA-binding domain complexed to its natural operator O3== | ||
| - | <StructureSection load='2kek' size='340' side='right' caption='[[2kek]], [[NMR_Ensembles_of_Models | 10 NMR models]]' scene=''> | + | <StructureSection load='2kek' size='340' side='right'caption='[[2kek]], [[NMR_Ensembles_of_Models | 10 NMR models]]' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2kek]] is a 4 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2kek]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Ecoli Ecoli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KEK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KEK FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1l1m|1l1m]], [[2kei|2kei]], [[2kej|2kej]]</td></tr> | + | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1l1m|1l1m]], [[2kei|2kei]], [[2kej|2kej]]</div></td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lacI, b0345, JW0336 ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lacI, b0345, JW0336 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kek FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kek OCA], [https://pdbe.org/2kek PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kek RCSB], [https://www.ebi.ac.uk/pdbsum/2kek PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kek ProSAT]</span></td></tr> |
| - | <table> | + | </table> |
| + | == Function == | ||
| + | [[https://www.uniprot.org/uniprot/LACI_ECOLI LACI_ECOLI]] Repressor of the lactose operon. Binds allolactose as an inducer. | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ke/2kek_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ke/2kek_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kek ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
| + | <div class="pdbe-citations 2kek" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[Lac repressor | + | *[[Lac repressor|Lac repressor]] |
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Ecoli]] |
| - | [[Category: Biris, N | + | [[Category: Large Structures]] |
| - | [[Category: Boelens, R | + | [[Category: Biris, N]] |
| - | [[Category: Folkers, G | + | [[Category: Boelens, R]] |
| - | [[Category: Kaptein, R | + | [[Category: Folkers, G]] |
| - | [[Category: Romanuka, J | + | [[Category: Kaptein, R]] |
| - | [[Category: Tishchenko, E | + | [[Category: Romanuka, J]] |
| - | [[Category: Wienk, H | + | [[Category: Tishchenko, E]] |
| + | [[Category: Wienk, H]] | ||
[[Category: Dna-binding]] | [[Category: Dna-binding]] | ||
[[Category: Lac operator]] | [[Category: Lac operator]] | ||
Current revision
Solution structure of a dimer of LAC repressor DNA-binding domain complexed to its natural operator O3
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