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=Diacylglycerol acyltransferase, DGAT=
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=Diacylglycerol acyltransferase 1, DGAT1, synthesizes triacylglycerides=
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<StructureSection load='6vz1' size='350' frame= 'true' side='right' caption='DGAT 6vz1' scene='87/877512/Basic_structure'/1>'
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<StructureSection load='6vz1' size='350' frame= 'true' side='right' caption='Shown is the overall structure of Diacylglycerol Acyltransferase 1 (DGAT1) with its two substrates Acyl-CoA and Diacylglycerol (DAG) bound, shown in beige as surface.' scene='87/877512/Basic_structure3/3'>
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==Introduction==
==Introduction==
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Diacylglycerol acyltransferase (<scene name='87/877509/Dgat_overview/2'>DGAT</scene>) is a membrane protein that synthesizes triacylglycerides from its two substrates diacylglycerol (DAG) and fatty acyl-CoA for dietary fat absorption and fat storage. DGAT can be found expressed in the small intestine’s epithelial cells, in the liver where it synthesizes fat for storage, and in the female mammary glands where it produces fat for milk <ref name="Wang">PMID: 32433610</ref>. DGAT is a member of the membrane-bound O- acyltransferases (MBOAT) family <ref name="Sui">PMID: 32433611</ref>. All of the enzymes within this family are transmembrane enzymes that acylate lipids or proteins. Additionally, MBOAT enzymes have a conserved MBOAT core, a channel-like region that acts as the enzyme’s active site. Another feature of note within this MBOAT core is the conserved catalytic Histidine. DGAT is a dimer that has two identical subunits. Each of the individual subunits contains an MBOAT core that acts as its active site. Each subunit also contains nine transmembrane alpha-helices (TM), 2 intracellular loops (IL), and one ER luminal loop (EL). TM2-9, IL1, and IL2 form the structure of the MBOAT core active site.
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Diacylglycerol acyltransferase 1 (<scene name='87/877512/Dgat_overview/6'>DGAT1</scene>) is a transmembrane protein that synthesizes [https://en.wikipedia.org/wiki/Triglyceride#:~:text=A%20triglyceride%20(TG%2C%20triacylglycerol%2C,as%20well%20as%20vegetable%20fat triacylglycerides]from its two substrates, [https://en.wikipedia.org/wiki/Diglyceride#:~:text=A%20diglyceride%2C%20or%20diacylglycerol%20(DAG,as%20emulsifiers%20in%20processed%20foods diacylglycerol] (DAG) and fatty [https://en.wikipedia.org/wiki/Acyl-CoA#:~:text=Acyl%2DCoA%20is%20a%20group,forming%20several%20equivalents%20of%20ATP acyl-CoA], for dietary fat absorption and fat storage. <ref name="Wang">PMID: 32433610</ref> DGAT1 can be found expressed in the epithelial cells of the small intestine, in the liver where it synthesizes fat for storage, and in the female mammary glands where it produces fat for milk. <ref name="Wang">PMID: 32433610</ref> DGAT1 is a member of the [https://en.wikipedia.org/wiki/MBOAT membrane-bound ''O''-acyltransferase] (MBOAT) family. <ref name="Sui">PMID: 32433611</ref> All of the enzymes within this MBOAT family are transmembrane enzymes that acylate lipids or proteins. <ref name="Ma">PMID: 30283133</ref> MBOAT enzymes have a conserved MBOAT core, which is a channel-like region that acts as the enzyme’s active site. <ref name="Ma">PMID: 30283133</ref> Additionally, enzymes within the MBOAT family also contain a catalytic histidine within the active site. <ref name="Ma">PMID: 30283133</ref>
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== Function ==
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== Structure ==
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DGAT synthesizes triacylglycerides from diacylglycerol (DAG) and fatty acyl-CoA.
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[[Image:Screen_Shot_2021-04-05_at_7.21.43_PM.png|500 px|right|thumb|'''Figure 1: DGAT1 Structure Overview''' Shown is one transmembrane subunit of DGAT1 with its N-terminus on the cytosolic side and its C-terminus on the luminal side. Labeled are the transmembrane domains (TM 1-7), the intracellular loops (IL1 and IL2), and the ER lumenal loop (EL1). The catalytic Histidine (His415) is labeled with a star on TM7.]]
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===Overview===
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DGAT1 is a dimer that has two identical <scene name='87/877512/Labeled_subunits/5'>subunits</scene>. Each subunit contains an MBOAT core that acts as its active site. Each subunit also contains <scene name='87/877512/Labeled_helices/3'>nine transmembrane helices</scene> (TM), 2 intracellular loops (IL), and one ER lumenal loop (EL).<ref name="Wang">PMID: 32433610</ref> TM2-9, IL1, and IL2 form the structure of the MBOAT core active site. A schematic of DGAT1’s structure is shown in Figure 1.
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== Structure ==
 
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[[Image:DGAT_Structure_Drawing.png|300 px|right|thumb|Figure 1: DGAT Structure]]
 
=== Dimer Interface ===
=== Dimer Interface ===
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DGAT is a dimer that has two identical subunits with 9 transmembrane alpha helices (TM), 2 intracellular loops (IL), and one ER luminal loop (EL). The dimer is held together at the dimer interface. Both <scene name='87/877512/Dimer_interface/5'>Hydrogen bonding</scene> and hydrophobic interactions between the residues of the TM1 and EL1 regions of both subunits act to hold the subunits of the dimer together.
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DGAT1 is a dimer that has two identical subunits with 9 transmembrane alpha helices (TM), 2 intracellular loops (IL), and one ER luminal loop (EL). The dimer is held together at the <scene name='87/877515/Dimer_interface-----/2'>dimer interface</scene>. Both hydrogen bonding and hydrophobic interactions between the residues of the TM1 regions of both subunits act to hold the subunits of the dimer together. <ref name="Sui">PMID: 32433611</ref> Identical domains are bound via <scene name='87/877512/Dimer_interface/8'>2 hydrogen bonds</scene> measuring 3.19 angstroms between tyrosine 85 and arginine 86 in each subunit. Also present are hydrophobic interactions from the same residues that are formed from pi cloud electrons in the tyrosine ring with the carbon chain in arginine.
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==Active Site ==
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===Overview===
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Depiction of the DGAT1 active site mechanism is shown in Figure 2. Oleoyl-CoA, the 18 carbon chain derivative of Acyl-CoA, was used to model the substrate Acyl-CoA.<ref name="Wang">PMID: 32433610</ref><ref name="Sui">PMID: 32433611</ref> DAG enters the active site of DGAT1 through its lateral gate while the catalytic His415 flips from the cytosolic side to the lumenal side, in order for the channel opening located on the cytosolic side of DGAT1 to widen enough to accommodate the Oleoyl-CoA.<ref name="Sui">PMID: 32433611</ref> The Oleoyl CoA then enters the active site through the channel opening located on the cytosolic side of DGAT1. When the Oleoyl-CoA and DAG are within close proximity in the active site, the catalytic His415 catalyzes the reaction.<ref name="Wang">PMID: 32433610</ref><ref name="Sui">PMID: 32433611</ref> The coenzyme A moiety exits through the channel located on the cytosolic side, while the product triacylglyceride exits through the lateral gate.
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[[Image:Screen_Shot_2021-04-27_at_4.59.44_PM.png|800 px|center|thumb|'''Figure 2: Active Site Mechanism Overview''' Modeled is the active site of one subunit of DGAT1 (shown in teal) with its catalytic Histidine (His415), Oleoyl CoA (shown in pink), and a general diacylglycerol (DAG, shown in yellow). Shown are the substrates Oleoyl-CoA and DAG entering the active site of DGAT1, being catalyzed by His415, and then leaving through the channel they entered.]]
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=== Oleoyl-CoA Binding ===
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Oleoyl-CoA enters DGAT1’s active site through a channel on the cytosolic side of the membrane. In order for the channel to widen and accommodate the fatty acid tail of the Oleoyl-CoA, <scene name='87/877512/Dgat_aligned2/17'>His415</scene> must flip from facing the cytosolic side to facing the lumenal side. It is speculated that the delta sulfur of the Met434 is involved in hydrogen bonding interactions with the catalytic His415 while it is flipped toward the cytosolic side of DGAT1 ([https://www.rcsb.org/structure/6VYI 6vyi]).<ref name="Sui">PMID: 32433611</ref> The His415 needs to break these speculated hydrogen bonds with Met434 to flip toward the lumenal side of DGAT1. Once <scene name='87/877512/Acyl_coa/2'>Oleoyl-CoA</scene> is bound in the active site, residues Asn378, Gln437, Met434, and Gln465 stabilize the fatty acid tail within the cytosolic channel of the active site, while residues His415 and Gln416 are directly involved within the catalytic mechanism of DGAT1.<ref name="Sui">PMID: 32433611</ref>
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=== DAG Binding ===
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<scene name='87/877512/Dag_binding/2'>DAG</scene> enters the active site through the lateral gate located in the lipid bilayer of the membrane. This lateral gate is a bent and hydrophobic channel that allows for hydrophobic linear or curvilinear molecules to enter.<ref name="Sui">PMID: 32433611</ref> The lateral gate channel is designed to allow for the entrance of DAG and the exit of a triacylglyceride. This channel is also lined with <scene name='87/877512/Lateral_gate_residues/4'>hydrophobic residues</scene> Phe342, Leu261, and Val381.<ref name="Wang">PMID: 32433610</ref><ref name="Sui">PMID: 32433611</ref> Once within the channel, DAG is positioned in close proximity to the bound Acyl-CoA and the catalytic His415.
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=== Active Site Structure ===
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=== Active Site ===
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The <scene name='87/877512/Active_site_zoomed_out/4'>active site</scene> is located within the pocket formed from TM2-TM9, IL1, and IL2, with the catalytic residue Histidine 415 located on TM7. It is accessible through openings both on the cytosolic and luminal sides. The active site of DGAT1 serves its catalytic function by placing the His415 residue in close proximity to the acyl-CoA in order to cleave its ester bond and bind the fatty acid to the diacylglycerol. The conserved His415 acts catalytically by a [https://www.genscript.com/molecular-biology-glossary/478/charge-relay-system#:~:text=A%20tautomeric%20form%20of%20a,another%20in%20the%20same%20protein charge relay system], where the negative charge of the neighboring Glu416 pulls on the electrons of histidine at the N1 position, making the N3 position more nucleophilic. This nitrogen will then deprotonate DAG so it can begin its attack on Acyl-CoA through [https://chem.libretexts.org/Bookshelves/Organic_Chemistry/Map%3A_Organic_Chemistry_(McMurry)/21%3A_Carboxylic_Acid_Derivatives-_Nucleophilic_Acyl_Substitution_Reactions/21.02%3A_Nucleophilic_Acyl_Substitution_Reactions acyl substitution]. The catalytic mechanism for DGAT1 is shown in Figure 3.<ref name="Wang">PMID: 32433610</ref>
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The <scene name='87/877509/Active_site/2'>Active Site Residues</scene> are Asn378, Gln437, Gln465, His415, and Met434. The active site of DGAT serves its catalytic function by placing the His415 residue in close proximity to the acyl-CoA in order to cleave its ester bond and thus bind the fatty acid to the diacylglycerol. The conserved His415 is able to act catalytically due to a charge relay system, where the neighboring Glu416, due to its negative charge pulls electrons on histidine at the N1 position, making the N3 position more nucleophilic. This nitrogen will then deprotonate DAG so it can begin its attack on Acyl-CoA through acyl substitution. The catalytic mechanism for DGAT is shown in Figure 1.
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The oxyanion hole of the acyl substitution intermediate should be stabilized by DGAT1. However, the two available PDB files for the substrate-bound DGAT1, [https://www.rcsb.org/structure/6VZ1 6vz1] and [https://www.rcsb.org/structure/6VP0 6vp0], do not show a possible stabilizing residue for the Oleoyl-CoA, the 18 carbon chain version of Acyl-CoA. The PDB file 6vz1 shows the sulfur of Oleoyl-CoA, the electrophile of the mechanism, <scene name='87/877512/Active_site_zoomed_in_6vz1/3'>facing away from His415</scene>. This is not likely to be the proper orientation for Oleoyl-CoA, as this sulfur would have to be facing towards the His415 to be protonated after the acyl substitution. For an oxyanion stabilizing residue to be located within this PDB file, the Oleoyl-CoA would have to be properly oriented. The other substrate-bound PDB file 6vp0 shows the sulfur of Oleoyl-CoA facing toward the His415. However, <scene name='87/877512/Active_site_zoomed_in_6vp0/2'>the tail of oleoyl-CoA is bent</scene> and curved around the oxyanion hole, preventing a stabilizing residue within DGAT1 to be found. For these reasons, an oxyanion stabilizing residue was not identified in the mechanism nor in the images.
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[[Image:DGAT_Mech.png|300 px|right|thumb|Figure 2: DGAT Mechanism]]
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[[Image:Ch463_dgat_mech2.jpeg|800 px|center|thumb|'''Figure 3: DGAT1 Mechanism''' The DGAT1 mechanism is an acyl substitution with DAG as the nucleophile and Acyl-CoA as the electrophile. His415 is the catalytic residue that deprotonates DAG to make it a better nucleophile. Glu416 stabilizes the His415. The residue that stabilizes the oxyanion hole of the intermediate is unknown.]]
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==== DAG Binding ====
 
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<scene name='87/877509/Dgat_bound_with_dag/1'>DAG</scene> enters the active site through the lateral gate located in the lipid bilayer of the membrane. This <scene name='87/877509/Surface_active_site/2'>Active Site Tunnel</scene> or lateral gate is a bent and hydrophobic channel that allows for hydrophobic linear or curvilinear molecules to enter. The lateral gate channel is designed to allow for the entrance of DAG and the exit of a triacylglyceride. This channel is also lined with the hydrophobic residues Phe342, Leu261, Val381, and Asn378. Once within the channel, DAG is positioned in close proximity to the bound Acyl-CoA and the catalytic His415.
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==Medical Relevance==
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=== Disease ===
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==== Acyl-CoA Binding ====
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[[Image:DGAT_INHIBITOR.png|400 px|right|thumb|'''Figure 4: DGAT1 Inhibitor AZD7687''' Shown is the structure of AZD7687, a known inhibitor of DGAT1.]]
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<scene name='87/877515/Acyl_coa/4'>Acyl-CoA</scene> enters DGAT’s active site through a channel on the cytosolic side of the membrane. In order for the channel to accommodate the fatty acid tail of the Acyl-CoA, His415 must first break its interactions with Met434. This allows for the His415 to swing down and have hydrogen bond interactions with Gln465, thus widening the channel enough for the fatty acid tail to move into the active site. Once <scene name='87/877509/Surface_active_site/3'>Acyl CoA is bound in the active site</scene>, residues Asn378, Gln437, Met434, His415, and Gln465 directly interact with and stabilize the fatty acid tail within the cytosolic channel of the active site.
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Obesity and nonalcoholic fatty liver disease ([https://www.mayoclinic.org/diseases-conditions/nonalcoholic-fatty-liver-disease/symptoms-causes/syc-20354567 NAFLD]) result from an accumulation of triacylglycerides within the body. Recently, DGAT1 has become a therapeutic target for obesity and nonalcoholic fatty liver disease in order to reduce triacylglyceride storage within the body.<ref name="Denison">PMID: 24118885</ref><ref name="Villanueva">PMID: 19472314</ref> Different inhibitors have been created, such as AstraZeneca’s direct inhibitor [https://www.apexbt.com/azd7687.html AZD7687], shown in Figure 4.<ref name="Denison">PMID: 24118885</ref> AZD7687 has an EC50 value 0.44 µmol/L, showing that it binds with high affinity at a low concentration of DGAT1.<ref name="Denison">PMID: 24118885</ref> However, while triacylglyceride accumulation decreased, negative side effects did occur, such as diarrhea and other adverse GI symptoms.<ref name="Denison">PMID: 24118885</ref>
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== Disease ==
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===Congenital Protein-Losing Enteropathy===
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Obesity and nonalcoholic fatty liver disease result from an accumulation of triglycerides within the body. Recently, DGAT has become a therapeutic target for obesity and nonalcoholic fatty liver disease in order to reduce triglyceride storage within the body. Different inhibitors have been created, such as AstraZeneca’s direct inhibitor AZD7687 <ref name="Denison">PMID: 24118885</ref>. However, while the triglyceride accumulation decreased, side effects did occur, such as diarrhea and other adverse GI symptoms. Additionally, congenital protein-losing enteropathy (PLE) is a GI disorder that results in the malabsorption of fat and a deficiency in fat-soluble vitamins. There has been a case study of congenital PLE patients that have a homozygous missense Leu295Pro mutation in their DGAT enzymes <ref name="Stephen">PMID: 26883093</ref>. This mutation is in a helix of the MBOAT core. Proline is a helix breaker, so it is hypothesized that this mutation breaks a helix in the MBOAT core that impacts its enzymatic activity and ability to make triacylglycerides. Without proper DGAT function to produce triacylglycerides, there is a decrease in albumin, which is a protein that helps prevent fluid leaking out of the liver and blood vessels. This decrease in albumin then leads to decreased efficiency in nutrient transport.
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Additionally, congenital protein-losing enteropathy ([https://www.uptodate.com/contents/protein-losing-gastroenteropathy PLE]) is linked to DGAT1 mutations. PLE is a GI disorder that causes malabsorption of fat and a deficiency in fat-soluble vitamins. Patients in a congenital PLE case study exhibited a homozygous missense Leu295Pro mutation within the MBOAT core of their DGAT1 enzymes.<ref name="Stephen">PMID: 26883093</ref> <scene name='87/877512/Mutation/6'>Leu295</scene> is located within the MBOAT core active site on TM5. While the Leu295 is not near the catalytic residues His415 and Glu416, the <scene name='88/880292/Cple/6'>Leu295Pro</scene> mutation will disrupt the overall active site. Proline is an alpha helix breaker because it causes steric hindrance within the backbone of the helix turn. It is hypothesized that this mutation breaks this helix in the MBOAT core and greatly reduces its enzymatic activity and ability to make triacylglycerides. Without proper DGAT1 function to produce triacylglycerides, there is a decrease in albumin, which is a protein that helps prevent fluid from leaking out of the liver and blood vessels.<ref name="Villanueva">PMID: 19472314</ref> This decrease in [https://medlineplus.gov/lab-tests/albumin-blood-test/#:~:text=Albumin%20is%20a%20protein%20made,with%20your%20liver%20or%20kidneys albumin] then leads to decreased efficiency in nutrient transport and fat absorption.
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== Relevance ==
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===Relevance===
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<ref name="Wang">PMID: 32433610</ref>
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<ref name="Sui">PMID: 32433611</ref>
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<ref name="Rebello">PMID: 31847611</ref>
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<ref name="Scott">PMID: 24440821</ref>
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<ref name="Stephen">PMID: 26883093</ref>
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<ref name="Denison">PMID: 24118885</ref>
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DGAT1 is an important enzyme in the synthesis of triacylglycerides and has relevance in the research of diseases that involve triacylglyceride accumulation, like obesity and NAFLD, or triacylglyceride reduction, like congenital PLE. There is an opportunity within pharmaceuticals for developing DGAT1 inhibitors like AZD7687 to lessen the severity of various diseases through a decrease in triacylglyceride storage. However, inhibitors will have to work around the symptoms of triacylglyceride reduction, as seen through the impact of the Leu295Pro mutation in congenital PLE patients. Developing an inhibitor that can balance DGAT1 efficacy between excess and deprivation of triacylglyceride synthesis can improve treatments for obesity, NAFLD, and other triacylglyceride storage diseases.
</StructureSection>
</StructureSection>
== References ==
== References ==

Current revision

Diacylglycerol acyltransferase 1, DGAT1, synthesizes triacylglycerides

Shown is the overall structure of Diacylglycerol Acyltransferase 1 (DGAT1) with its two substrates Acyl-CoA and Diacylglycerol (DAG) bound, shown in beige as surface.

Drag the structure with the mouse to rotate

References

  1. 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Wang L, Qian H, Nian Y, Han Y, Ren Z, Zhang H, Hu L, Prasad BVV, Laganowsky A, Yan N, Zhou M. Structure and mechanism of human diacylglycerol O-acyltransferase 1. Nature. 2020 May;581(7808):329-332. doi: 10.1038/s41586-020-2280-2. Epub 2020 May, 13. PMID:32433610 doi:http://dx.doi.org/10.1038/s41586-020-2280-2
  2. 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 Sui X, Wang K, Gluchowski NL, Elliott SD, Liao M, Walther TC, Farese RV Jr. Structure and catalytic mechanism of a human triacylglycerol-synthesis enzyme. Nature. 2020 May;581(7808):323-328. doi: 10.1038/s41586-020-2289-6. Epub 2020 May, 13. PMID:32433611 doi:http://dx.doi.org/10.1038/s41586-020-2289-6
  3. 3.0 3.1 3.2 Ma D, Wang Z, Merrikh CN, Lang KS, Lu P, Li X, Merrikh H, Rao Z, Xu W. Crystal structure of a membrane-bound O-acyltransferase. Nature. 2018 Oct;562(7726):286-290. doi: 10.1038/s41586-018-0568-2. Epub 2018 Oct, 3. PMID:30283133 doi:http://dx.doi.org/10.1038/s41586-018-0568-2
  4. 4.0 4.1 4.2 4.3 Denison H, Nilsson C, Lofgren L, Himmelmann A, Martensson G, Knutsson M, Al-Shurbaji A, Tornqvist H, Eriksson JW. Diacylglycerol acyltransferase 1 inhibition with AZD7687 alters lipid handling and hormone secretion in the gut with intolerable side effects: a randomized clinical trial. Diabetes Obes Metab. 2014 Apr;16(4):334-43. doi: 10.1111/dom.12221. Epub 2013 Oct, 31. PMID:24118885 doi:http://dx.doi.org/10.1111/dom.12221
  5. 5.0 5.1 Villanueva CJ, Monetti M, Shih M, Zhou P, Watkins SM, Bhanot S, Farese RV Jr. Specific role for acyl CoA:Diacylglycerol acyltransferase 1 (Dgat1) in hepatic steatosis due to exogenous fatty acids. Hepatology. 2009 Aug;50(2):434-42. doi: 10.1002/hep.22980. PMID:19472314 doi:http://dx.doi.org/10.1002/hep.22980
  6. Stephen J, Vilboux T, Haberman Y, Pri-Chen H, Pode-Shakked B, Mazaheri S, Marek-Yagel D, Barel O, Di Segni A, Eyal E, Hout-Siloni G, Lahad A, Shalem T, Rechavi G, Malicdan MC, Weiss B, Gahl WA, Anikster Y. Congenital protein losing enteropathy: an inborn error of lipid metabolism due to DGAT1 mutations. Eur J Hum Genet. 2016 Aug;24(9):1268-73. doi: 10.1038/ejhg.2016.5. Epub 2016 Feb , 17. PMID:26883093 doi:http://dx.doi.org/10.1038/ejhg.2016.5

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