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7bhr
From Proteopedia
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==Crystal structure of MAT2a with triazinone fragment 1 bound in the allosteric site== | ==Crystal structure of MAT2a with triazinone fragment 1 bound in the allosteric site== | ||
| - | <StructureSection load='7bhr' size='340' side='right'caption='[[7bhr]]' scene=''> | + | <StructureSection load='7bhr' size='340' side='right'caption='[[7bhr]], [[Resolution|resolution]] 1.08Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7BHR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7BHR FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7bhr]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7BHR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7BHR FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7bhr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7bhr OCA], [https://pdbe.org/7bhr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7bhr RCSB], [https://www.ebi.ac.uk/pdbsum/7bhr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7bhr ProSAT]</span></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene>, <scene name='pdbligand=TQE:4-(dimethylamino)-6-ethoxy-1~{H}-1,3,5-triazin-2-one'>TQE</scene></td></tr> |
| + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Methionine_adenosyltransferase Methionine adenosyltransferase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.6 2.5.1.6] </span></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7bhr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7bhr OCA], [https://pdbe.org/7bhr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7bhr RCSB], [https://www.ebi.ac.uk/pdbsum/7bhr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7bhr ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [[https://www.uniprot.org/uniprot/METK2_HUMAN METK2_HUMAN]] Catalyzes the formation of S-adenosylmethionine from methionine and ATP. | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | MAT2a is a methionine adenosyltransferase that synthesizes the essential metabolite S-adenosylmethionine (SAM) from methionine and ATP. Tumors bearing the co-deletion of p16 and MTAP genes have been shown to be sensitive to MAT2a inhibition, making it an attractive target for treatment of MTAP-deleted cancers. A fragment-based lead generation campaign identified weak but efficient hits binding in a known allosteric site. By use of structure-guided design and systematic SAR exploration, the hits were elaborated through a merging and growing strategy into an arylquinazolinone series of potent MAT2a inhibitors. The selected in vivo tool compound 28 reduced SAM-dependent methylation events in cells and inhibited proliferation of MTAP-null cells in vitro. In vivo studies showed that 28 was able to induce antitumor response in an MTAP knockout HCT116 xenograft model. | ||
| + | |||
| + | Fragment-Based Design of a Potent MAT2a Inhibitor and in Vivo Evaluation in an MTAP Null Xenograft Model.,De Fusco C, Schimpl M, Borjesson U, Cheung T, Collie I, Evans L, Narasimhan P, Stubbs C, Vazquez-Chantada M, Wagner DJ, Grondine M, Sanders MG, Tentarelli S, Underwood E, Argyrou A, Smith JM, Lynch JT, Chiarparin E, Robb G, Bagal SK, Scott JS J Med Chem. 2021 Apr 26. doi: 10.1021/acs.jmedchem.1c00067. PMID:33900758<ref>PMID:33900758</ref> | ||
| + | |||
| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 7bhr" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Argyrou A]] | + | [[Category: Methionine adenosyltransferase]] |
| - | [[Category: Bagal S]] | + | [[Category: Argyrou, A]] |
| - | [[Category: Borjesson U]] | + | [[Category: Bagal, S]] |
| - | [[Category: Cheung T]] | + | [[Category: Borjesson, U]] |
| - | [[Category: Chiarparin E]] | + | [[Category: Cheung, T]] |
| - | [[Category: Collie I]] | + | [[Category: Chiarparin, E]] |
| - | [[Category: | + | [[Category: Collie, I]] |
| - | [[Category: | + | [[Category: Evans, L]] |
| - | [[Category: Grondine M]] | + | [[Category: Fusco, C De]] |
| - | [[Category: Narasimhan P]] | + | [[Category: Grondine, M]] |
| - | [[Category: Robb G]] | + | [[Category: Narasimhan, P]] |
| - | [[Category: Schimpl M]] | + | [[Category: Robb, G]] |
| - | [[Category: Scott | + | [[Category: Schimpl, M]] |
| - | [[Category: Stubbs C]] | + | [[Category: Scott, J S]] |
| - | [[Category: Tentarelli S]] | + | [[Category: Stubbs, C]] |
| - | [[Category: Underwood E]] | + | [[Category: Tentarelli, S]] |
| - | [[Category: Vazquez-Chantada M]] | + | [[Category: Underwood, E]] |
| - | [[Category: Wagner | + | [[Category: Vazquez-Chantada, M]] |
| + | [[Category: Wagner, D J]] | ||
| + | [[Category: Allosteric inhibitor]] | ||
| + | [[Category: Fragment-based drug design]] | ||
| + | [[Category: Oncology]] | ||
| + | [[Category: Synthetic lethal therapy]] | ||
| + | [[Category: Transferase]] | ||
Revision as of 09:07, 5 May 2021
Crystal structure of MAT2a with triazinone fragment 1 bound in the allosteric site
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Categories: Large Structures | Methionine adenosyltransferase | Argyrou, A | Bagal, S | Borjesson, U | Cheung, T | Chiarparin, E | Collie, I | Evans, L | Fusco, C De | Grondine, M | Narasimhan, P | Robb, G | Schimpl, M | Scott, J S | Stubbs, C | Tentarelli, S | Underwood, E | Vazquez-Chantada, M | Wagner, D J | Allosteric inhibitor | Fragment-based drug design | Oncology | Synthetic lethal therapy | Transferase
