This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2fx5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:56, 5 May 2021) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2fx5.gif|left|200px]]<br /><applet load="2fx5" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2fx5, resolution 1.8&Aring;" />
 
-
'''Pseudomonas mendocina lipase'''<br />
 
-
==About this Structure==
+
==Pseudomonas mendocina lipase==
-
2FX5 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_mendocina Pseudomonas mendocina] with <scene name='pdbligand=TLA:'>TLA</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Triacylglycerol_lipase Triacylglycerol lipase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.1.3 3.1.1.3] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FX5 OCA].
+
<StructureSection load='2fx5' size='340' side='right'caption='[[2fx5]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
[[Category: Pseudomonas mendocina]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[2fx5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_25411 Atcc 25411]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FX5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FX5 FirstGlance]. <br>
-
[[Category: Triacylglycerol lipase]]
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=TLA:L(+)-TARTARIC+ACID'>TLA</scene></td></tr>
-
[[Category: Bott, R.]]
+
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Triacylglycerol_lipase Triacylglycerol lipase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.1.3 3.1.1.3] </span></td></tr>
-
[[Category: Wu, S.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fx5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fx5 OCA], [https://pdbe.org/2fx5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fx5 RCSB], [https://www.ebi.ac.uk/pdbsum/2fx5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fx5 ProSAT]</span></td></tr>
-
[[Category: TLA]]
+
</table>
-
[[Category: alpha-beta hydrolase]]
+
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fx/2fx5_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fx5 ConSurf].
 +
<div style="clear:both"></div>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:26:01 2008''
+
==See Also==
 +
*[[Lipase 3D Structures|Lipase 3D Structures]]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Atcc 25411]]
 +
[[Category: Large Structures]]
 +
[[Category: Triacylglycerol lipase]]
 +
[[Category: Bott, R]]
 +
[[Category: Wu, S]]
 +
[[Category: Alpha-beta hydrolase]]
 +
[[Category: Hydrolase]]

Current revision

Pseudomonas mendocina lipase

PDB ID 2fx5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools