This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6tak

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Crystal structure of Escherichia coli Orotate Phosphoribosyltransferase in complex with Orotic acid and Sulfate at 1.25 Angstrom resolution==
==Crystal structure of Escherichia coli Orotate Phosphoribosyltransferase in complex with Orotic acid and Sulfate at 1.25 Angstrom resolution==
-
<StructureSection load='6tak' size='340' side='right'caption='[[6tak]]' scene=''>
+
<StructureSection load='6tak' size='340' side='right'caption='[[6tak]], [[Resolution|resolution]] 1.25&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6TAK OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6TAK FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6tak]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Ecoli Ecoli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6TAK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6TAK FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6tak FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6tak OCA], [http://pdbe.org/6tak PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6tak RCSB], [http://www.ebi.ac.uk/pdbsum/6tak PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6tak ProSAT]</span></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ORO:OROTIC+ACID'>ORO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
 +
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">pyrE, b3642, JW3617 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
 +
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Orotate_phosphoribosyltransferase Orotate phosphoribosyltransferase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.10 2.4.2.10] </span></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6tak FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6tak OCA], [https://pdbe.org/6tak PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6tak RCSB], [https://www.ebi.ac.uk/pdbsum/6tak PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6tak ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[[https://www.uniprot.org/uniprot/PYRE_ECOLI PYRE_ECOLI]] Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) (By similarity).<ref>PMID:8620002</ref>
 +
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Ecoli]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Fernandez FJ]]
+
[[Category: Orotate phosphoribosyltransferase]]
-
[[Category: Gomez S]]
+
[[Category: Fernandez, F J]]
-
[[Category: Lopez-Estepa M]]
+
[[Category: Gomez, S]]
-
[[Category: Navas-Yuste S]]
+
[[Category: Lopez-Estepa, M]]
-
[[Category: Vega MC]]
+
[[Category: Navas-Yuste, S]]
 +
[[Category: Vega, M C]]
 +
[[Category: Orotic acid]]
 +
[[Category: Sulfate]]
 +
[[Category: Transferase]]

Revision as of 12:24, 9 June 2021

Crystal structure of Escherichia coli Orotate Phosphoribosyltransferase in complex with Orotic acid and Sulfate at 1.25 Angstrom resolution

PDB ID 6tak

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools