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2osu
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="2osu" size="450" color="white" frame="true" align="right" spinBox="true" caption="2osu, resolution 2.29Å" /> '''Probable glutaminase...) |
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| - | [[Image:2osu.jpg|left|200px]]<br /><applet load="2osu" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2osu, resolution 2.29Å" /> | ||
| - | '''Probable glutaminase from Bacillus subtilis complexed with 6-diazo-5-oxo-L-norleucine'''<br /> | ||
| - | == | + | ==Probable glutaminase from Bacillus subtilis complexed with 6-diazo-5-oxo-L-norleucine== |
| - | + | <StructureSection load='2osu' size='340' side='right'caption='[[2osu]], [[Resolution|resolution]] 2.29Å' scene=''> | |
| - | [ | + | == Structural highlights == |
| - | + | <table><tr><td colspan='2'>[[2osu]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"vibrio_subtilis"_ehrenberg_1835 "vibrio subtilis" ehrenberg 1835]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OSU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OSU FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DON:6-DIAZENYL-5-OXO-L-NORLEUCINE'>DON</scene></td></tr> | |
| - | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | [ | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1mki|1mki]]</div></td></tr> |
| - | [ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">glsA1, glsA, BSU02430 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Vibrio subtilis" Ehrenberg 1835])</td></tr> |
| - | [ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Glutaminase Glutaminase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.2 3.5.1.2] </span></td></tr> |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2osu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2osu OCA], [https://pdbe.org/2osu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2osu RCSB], [https://www.ebi.ac.uk/pdbsum/2osu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2osu ProSAT], [https://www.topsan.org/Proteins/MCSG/2osu TOPSAN]</span></td></tr> | |
| - | [[ | + | </table> |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | + | Check<jmol> | |
| - | [ | + | <jmolCheckbox> |
| - | [[ | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/os/2osu_consurf.spt"</scriptWhenChecked> |
| - | [ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | + | <text>to colour the structure by Evolutionary Conservation</text> | |
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2osu ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | + | ==See Also== | |
| + | *[[Glutaminase 3D structures|Glutaminase 3D structures]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Vibrio subtilis ehrenberg 1835]] | ||
| + | [[Category: Glutaminase]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Collart, F]] | ||
| + | [[Category: Dementieva, I]] | ||
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Kim, Y]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Vinokour, E]] | ||
| + | [[Category: Alpha-beta structure]] | ||
| + | [[Category: Hydrolase]] | ||
| + | [[Category: Mcsg]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
Current revision
Probable glutaminase from Bacillus subtilis complexed with 6-diazo-5-oxo-L-norleucine
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