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2oyr

From Proteopedia

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[[Image:2oyr.jpg|left|200px]]
 
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{{Structure
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==Crystal Structure of UPF0341 Protein (yhiQ) from Shigella flexneri in complex with S-Adenosyl Homocysteine, Northeast Structural Genomics Target SfR275==
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|PDB= 2oyr |SIZE=350|CAPTION= <scene name='initialview01'>2oyr</scene>, resolution 2.00&Aring;
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<StructureSection load='2oyr' size='340' side='right'caption='[[2oyr]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene>
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<table><tr><td colspan='2'>[[2oyr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Shigella_flexneri_2a Shigella flexneri 2a]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OYR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OYR FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>
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|GENE= yhiQ, SF3528, S_4240 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=42897 Shigella flexneri 2a])
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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}}
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yhiQ, SF3528, S_4240 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=42897 Shigella flexneri 2a])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2oyr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oyr OCA], [https://pdbe.org/2oyr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2oyr RCSB], [https://www.ebi.ac.uk/pdbsum/2oyr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2oyr ProSAT], [https://www.topsan.org/Proteins/NESGC/2oyr TOPSAN]</span></td></tr>
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'''Crystal Structure of UPF0341 Protein (yhiQ) from Shigella flexneri in complex with S-Adenosyl Homocysteine, Northeast Structural Genomics Target SfR275'''
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</table>
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== Function ==
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[[https://www.uniprot.org/uniprot/RSMJ_SHIFL RSMJ_SHIFL]] Specifically methylates the guanosine in position 1516 of 16S rRNA.[HAMAP-Rule:MF_01523]
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==About this Structure==
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== Evolutionary Conservation ==
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2OYR is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Shigella_flexneri_2a Shigella flexneri 2a]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OYR OCA].
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oy/2oyr_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2oyr ConSurf].
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<div style="clear:both"></div>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
[[Category: Shigella flexneri 2a]]
[[Category: Shigella flexneri 2a]]
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[[Category: Single protein]]
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[[Category: Acton, T B]]
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[[Category: Acton, T B.]]
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[[Category: Baran, M C]]
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[[Category: Baran, M C.]]
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[[Category: Fang, Y]]
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[[Category: Fang, Y.]]
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[[Category: Forouhar, F]]
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[[Category: Forouhar, F.]]
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[[Category: Hunt, J F]]
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[[Category: Hunt, J F.]]
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[[Category: Janjua, H]]
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[[Category: Janjua, H.]]
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[[Category: Liu, J]]
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[[Category: Liu, J.]]
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[[Category: Montelione, G T]]
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[[Category: Montelione, G T.]]
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[[Category: Structural genomic]]
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[[Category: NESG, Northeast Structural Genomics Consortium.]]
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[[Category: Seetharaman, J]]
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[[Category: Seetharaman, J.]]
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[[Category: Su, M]]
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[[Category: Su, M.]]
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[[Category: Tong, L]]
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[[Category: Tong, L.]]
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[[Category: Xiao, R]]
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[[Category: Xiao, R.]]
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[[Category: Alpha-beta protein]]
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[[Category: SAH]]
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[[Category: Nesg]]
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[[Category: alpha-beta protein]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: nesg]]
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[[Category: Unknown function]]
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[[Category: northeast structural genomics consortium]]
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[[Category: protein structure initiative]]
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[[Category: psi-2]]
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[[Category: structural genomic]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:06:20 2008''
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Current revision

Crystal Structure of UPF0341 Protein (yhiQ) from Shigella flexneri in complex with S-Adenosyl Homocysteine, Northeast Structural Genomics Target SfR275

PDB ID 2oyr

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