This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2p0o
From Proteopedia
(Difference between revisions)
| (13 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2p0o.jpg|left|200px]]<br /><applet load="2p0o" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2p0o, resolution 2.15Å" /> | ||
| - | '''Crystal structure of a conserved protein from locus EF_2437 in Enterococcus faecalis with an unknown function'''<br /> | ||
| - | == | + | ==Crystal structure of a conserved protein from locus EF_2437 in Enterococcus faecalis with an unknown function== |
| - | + | <StructureSection load='2p0o' size='340' side='right'caption='[[2p0o]], [[Resolution|resolution]] 2.15Å' scene=''> | |
| - | [[ | + | == Structural highlights == |
| - | [ | + | <table><tr><td colspan='2'>[[2p0o]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Entfa Entfa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P0O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P0O FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> |
| - | [ | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | [[ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">EF_2437 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=226185 ENTFA])</td></tr> |
| - | [[Category: | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p0o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p0o OCA], [https://pdbe.org/2p0o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p0o RCSB], [https://www.ebi.ac.uk/pdbsum/2p0o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p0o ProSAT], [https://www.topsan.org/Proteins/MCSG/2p0o TOPSAN]</span></td></tr> |
| - | [[Category: | + | </table> |
| - | [[Category: | + | == Evolutionary Conservation == |
| - | [[Category: | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[Category: | + | Check<jmol> |
| - | [[Category: | + | <jmolCheckbox> |
| - | [[Category: | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p0/2p0o_consurf.spt"</scriptWhenChecked> |
| - | [[Category: | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: | + | </jmolCheckbox> |
| - | [[Category: | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p0o ConSurf]. |
| - | [[Category: | + | <div style="clear:both"></div> |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| + | [[Category: Entfa]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Cuff, M E]] | ||
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Moy, S]] | ||
| + | [[Category: Zhou, M]] | ||
| + | [[Category: Enterococcus faecali]] | ||
| + | [[Category: Mcsg]] | ||
| + | [[Category: Pf05913]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
| + | [[Category: Tim barrel]] | ||
| + | [[Category: Unknown function]] | ||
Current revision
Crystal structure of a conserved protein from locus EF_2437 in Enterococcus faecalis with an unknown function
| |||||||||||

