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2pd0
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="2pd0" size="350" color="white" frame="true" align="right" spinBox="true" caption="2pd0, resolution 2.30Å" /> '''Protein cgd2_2020 fr...) |
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| - | [[Image:2pd0.gif|left|200px]]<br /><applet load="2pd0" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2pd0, resolution 2.30Å" /> | ||
| - | '''Protein cgd2_2020 from Cryptosporidium parvum'''<br /> | ||
| - | == | + | ==Protein cgd2_2020 from Cryptosporidium parvum== |
| - | + | <StructureSection load='2pd0' size='340' side='right'caption='[[2pd0]], [[Resolution|resolution]] 2.30Å' scene=''> | |
| - | [[Category: | + | == Structural highlights == |
| - | [[Category: | + | <table><tr><td colspan='2'>[[2pd0]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Crypv Crypv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PD0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PD0 FirstGlance]. <br> |
| - | [[Category: Arrowsmith, C | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene></td></tr> |
| - | [[Category: Artz, J | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | [[Category: Bochkarev, A | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">XP_626409 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5807 CRYPV])</td></tr> |
| - | [[Category: Chruszcz, M | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pd0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pd0 OCA], [https://pdbe.org/2pd0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pd0 RCSB], [https://www.ebi.ac.uk/pdbsum/2pd0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pd0 ProSAT]</span></td></tr> |
| - | [[Category: Cymborowski, M | + | </table> |
| - | [[Category: Edwards, A | + | == Evolutionary Conservation == |
| - | [[Category: Hills, T | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[Category: Hui, R | + | Check<jmol> |
| - | [[Category: Lew, J | + | <jmolCheckbox> |
| - | [[Category: Melone, M | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pd/2pd0_consurf.spt"</scriptWhenChecked> |
| - | [[Category: Minor, W | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: Sundstrom, M | + | </jmolCheckbox> |
| - | [[Category: Weigelt, J | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pd0 ConSurf]. |
| - | [[Category: Wernimont, A | + | <div style="clear:both"></div> |
| - | [[Category: Zhao, Y | + | __TOC__ |
| - | [[Category: | + | </StructureSection> |
| - | [[Category: | + | [[Category: Crypv]] |
| - | + | [[Category: Large Structures]] | |
| - | + | [[Category: Arrowsmith, C]] | |
| - | + | [[Category: Artz, J]] | |
| - | + | [[Category: Bochkarev, A]] | |
| + | [[Category: Chruszcz, M]] | ||
| + | [[Category: Cymborowski, M]] | ||
| + | [[Category: Edwards, A]] | ||
| + | [[Category: Hills, T]] | ||
| + | [[Category: Hui, R]] | ||
| + | [[Category: Lew, J]] | ||
| + | [[Category: Melone, M]] | ||
| + | [[Category: Minor, W]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Sundstrom, M]] | ||
| + | [[Category: Weigelt, J]] | ||
| + | [[Category: Wernimont, A]] | ||
| + | [[Category: Zhao, Y]] | ||
| + | [[Category: Sgc]] | ||
| + | [[Category: Unknown function]] | ||
Current revision
Protein cgd2_2020 from Cryptosporidium parvum
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Categories: Crypv | Large Structures | Arrowsmith, C | Artz, J | Bochkarev, A | Chruszcz, M | Cymborowski, M | Edwards, A | Hills, T | Hui, R | Lew, J | Melone, M | Minor, W | Structural genomic | Sundstrom, M | Weigelt, J | Wernimont, A | Zhao, Y | Sgc | Unknown function
