This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2pk7
From Proteopedia
(Difference between revisions)
| (11 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2pk7.jpg|left|200px]] | ||
| - | + | ==Crystal structure of the Q4KFT4_PSEF5 protein from Pseudomonas fluorescens. NESG target PlR1== | |
| - | + | <StructureSection load='2pk7' size='340' side='right'caption='[[2pk7]], [[Resolution|resolution]] 2.20Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | | | + | <table><tr><td colspan='2'>[[2pk7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Psef5 Psef5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PK7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PK7 FirstGlance]. <br> |
| - | | | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | | | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2hf1|2hf1]]</div></td></tr> |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PFL_1779 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=220664 PSEF5])</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pk7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pk7 OCA], [https://pdbe.org/2pk7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pk7 RCSB], [https://www.ebi.ac.uk/pdbsum/2pk7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pk7 ProSAT], [https://www.topsan.org/Proteins/NESGC/2pk7 TOPSAN]</span></td></tr> | |
| - | ''' | + | </table> |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | == | + | Check<jmol> |
| - | + | <jmolCheckbox> | |
| - | [[Category: | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pk/2pk7_consurf.spt"</scriptWhenChecked> |
| - | [[Category: | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: Acton, T | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: Chen, C X | + | </jmolCheckbox> |
| - | [[Category: Hunt, J F | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pk7 ConSurf]. |
| - | [[Category: Janjua, H | + | <div style="clear:both"></div> |
| - | [[Category: Jayaraman, S | + | __TOC__ |
| - | [[Category: Montelione, G T | + | </StructureSection> |
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Neely, H | + | [[Category: Psef5]] |
| - | [[Category: Tong, L | + | [[Category: Acton, T]] |
| - | [[Category: Vorobiev, S M | + | [[Category: Chen, C X]] |
| - | [[Category: Xiao, R | + | [[Category: Hunt, J F]] |
| - | [[Category: | + | [[Category: Janjua, H]] |
| - | [[Category: | + | [[Category: Jayaraman, S]] |
| - | [[Category: | + | [[Category: Montelione, G T]] |
| - | + | [[Category: Structural genomic]] | |
| - | [[Category: | + | [[Category: Neely, H]] |
| - | + | [[Category: Tong, L]] | |
| - | [[Category: | + | [[Category: Vorobiev, S M]] |
| - | [[Category: | + | [[Category: Xiao, R]] |
| - | + | [[Category: Nesg]] | |
| - | + | [[Category: Plr1]] | |
| + | [[Category: PSI, Protein structure initiative]] | ||
| + | [[Category: Putative tetraacyldisaccharide-1-p 4-kinase]] | ||
| + | [[Category: Q4kft4]] | ||
| + | [[Category: Unknown function]] | ||
Current revision
Crystal structure of the Q4KFT4_PSEF5 protein from Pseudomonas fluorescens. NESG target PlR1
| |||||||||||
Categories: Large Structures | Psef5 | Acton, T | Chen, C X | Hunt, J F | Janjua, H | Jayaraman, S | Montelione, G T | Structural genomic | Neely, H | Tong, L | Vorobiev, S M | Xiao, R | Nesg | Plr1 | PSI, Protein structure initiative | Putative tetraacyldisaccharide-1-p 4-kinase | Q4kft4 | Unknown function
