This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2pmq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:27, 17 June 2021) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2pmq.jpg|left|200px]]
 
-
{{Structure
+
==Crystal structure of a mandelate racemase/muconate lactonizing enzyme from Roseovarius sp. HTCC2601==
-
|PDB= 2pmq |SIZE=350|CAPTION= <scene name='initialview01'>2pmq</scene>, resolution 1.720&Aring;
+
<StructureSection load='2pmq' size='340' side='right'caption='[[2pmq]]' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PMQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PMQ FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pmq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pmq OCA], [https://pdbe.org/2pmq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pmq RCSB], [https://www.ebi.ac.uk/pdbsum/2pmq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pmq ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2pmq TOPSAN]</span></td></tr>
-
|GENE= R2601_01638 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=314265 Roseovarius sp. HTCC2601])
+
</table>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG4948 COG4948], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03318 MLE]</span>
+
== Evolutionary Conservation ==
-
|RELATEDENTRY=
+
[[Image:Consurf_key_small.gif|200px|right]]
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pmq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pmq OCA], [http://www.ebi.ac.uk/pdbsum/2pmq PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2pmq RCSB]</span>
+
Check<jmol>
-
}}
+
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pm/2pmq_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pmq ConSurf].
 +
<div style="clear:both"></div>
-
'''Crystal structure of a mandelate racemase/muconate lactonizing enzyme from Roseovarius sp. HTCC2601'''
+
==See Also==
-
 
+
*[[Mandelate racemase|Mandelate racemase]]
-
 
+
*[[Mandelate racemase/muconate lactonizing enzyme 3D structures|Mandelate racemase/muconate lactonizing enzyme 3D structures]]
-
==About this Structure==
+
__TOC__
-
2PMQ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Roseovarius_sp._htcc2601 Roseovarius sp. htcc2601]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PMQ OCA].
+
</StructureSection>
-
[[Category: Roseovarius sp. htcc2601]]
+
[[Category: Large Structures]]
-
[[Category: Single protein]]
+
[[Category: Almo SC]]
-
[[Category: Almo, S C.]]
+
[[Category: Bain KT]]
-
[[Category: Bain, K T.]]
+
[[Category: Bonanno JB]]
-
[[Category: Bonanno, J B.]]
+
[[Category: Burley SK]]
-
[[Category: Burley, S K.]]
+
[[Category: Lau C]]
-
[[Category: Lau, C.]]
+
[[Category: Rutter M]]
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
[[Category: Sauder JM]]
-
[[Category: Rutter, M.]]
+
[[Category: Smith D]]
-
[[Category: Sauder, M J.]]
+
[[Category: Sridhar V]]
-
[[Category: Smith, D.]]
+
[[Category: Wasserman S]]
-
[[Category: Sridhar, V.]]
+
-
[[Category: Wasserman, S.]]
+
-
[[Category: isomerase]]
+
-
[[Category: new york structural genomix research consortium]]
+
-
[[Category: nysgxrc]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi-2]]
+
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:38:09 2008''
+

Current revision

Crystal structure of a mandelate racemase/muconate lactonizing enzyme from Roseovarius sp. HTCC2601

PDB ID 2pmq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2pmq"
Personal tools