This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2pof

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:28, 17 June 2021) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2pof.gif|left|200px]]
 
-
{{Structure
+
==Crystal structure of CDP-diacylglycerol pyrophosphatase==
-
|PDB= 2pof |SIZE=350|CAPTION= <scene name='initialview01'>2pof</scene>, resolution 1.40&Aring;
+
<StructureSection load='2pof' size='340' side='right'caption='[[2pof]]' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2POF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2POF FirstGlance]. <br>
-
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/CDP-diacylglycerol_diphosphatase CDP-diacylglycerol diphosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.1.26 3.6.1.26] </span>
+
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pof FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pof OCA], [https://pdbe.org/2pof PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pof RCSB], [https://www.ebi.ac.uk/pdbsum/2pof PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pof ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2pof TOPSAN]</span></td></tr>
-
|GENE= cdh, Z5463, ECs4843 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83334 Escherichia coli O157:H7])
+
</table>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02611 CDH]</span>
+
== Evolutionary Conservation ==
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pof FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pof OCA], [http://www.ebi.ac.uk/pdbsum/2pof PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2pof RCSB]</span>
+
[[Image:Consurf_key_small.gif|200px|right]]
-
}}
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
'''Crystal structure of CDP-diacylglycerol pyrophosphatase'''
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/po/2pof_consurf.spt"</scriptWhenChecked>
-
 
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
2POF is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_o157:h7 Escherichia coli o157:h7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2POF OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pof ConSurf].
-
[[Category: CDP-diacylglycerol diphosphatase]]
+
<div style="clear:both"></div>
-
[[Category: Escherichia coli o157:h7]]
+
__TOC__
-
[[Category: Single protein]]
+
</StructureSection>
-
[[Category: Burley, S K.]]
+
[[Category: Large Structures]]
-
[[Category: Eswaramoorthy, S.]]
+
[[Category: Burley SK]]
-
[[Category: Madegowda, M.]]
+
[[Category: Eswaramoorthy S]]
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
[[Category: Madegowda M]]
-
[[Category: Swaminathan, S.]]
+
[[Category: Swaminathan S]]
-
[[Category: 10285a]]
+
-
[[Category: new york structural genomix research consortium]]
+
-
[[Category: nysgxrc]]
+
-
[[Category: pfam02611]]
+
-
[[Category: phospholipid biosynthesis]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi-2]]
+
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:40:17 2008''
+

Current revision

Crystal structure of CDP-diacylglycerol pyrophosphatase

PDB ID 2pof

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2pof"
Personal tools