This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2qgm

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:19, 25 June 2021) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2qgm.gif|left|200px]]
 
-
{{Structure
+
==Crystal structure of succinoglycan biosynthesis protein at the resolution 1.7 A. Northeast Structural Genomics Consortium target BcR136.==
-
|PDB= 2qgm |SIZE=350|CAPTION= <scene name='initialview01'>2qgm</scene>, resolution 1.70&Aring;
+
<StructureSection load='2qgm' size='340' side='right'caption='[[2qgm]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+
<table><tr><td colspan='2'>[[2qgm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Baccr Baccr]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QGM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QGM FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
|GENE= BC_3205 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=226900 Bacillus cereus ATCC 14579])
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BC_3205 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=226900 BACCR])</td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG2312 COG2312]</span>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qgm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qgm OCA], [https://pdbe.org/2qgm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qgm RCSB], [https://www.ebi.ac.uk/pdbsum/2qgm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qgm ProSAT], [https://www.topsan.org/Proteins/NESGC/2qgm TOPSAN]</span></td></tr>
-
|RELATEDENTRY=
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qgm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qgm OCA], [http://www.ebi.ac.uk/pdbsum/2qgm PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2qgm RCSB]</span>
+
== Evolutionary Conservation ==
-
}}
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
'''Crystal structure of succinoglycan biosynthesis protein at the resolution 1.7 A. Northeast Structural Genomics Consortium target BcR136.'''
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qg/2qgm_consurf.spt"</scriptWhenChecked>
-
 
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
==About this Structure==
+
<text>to colour the structure by Evolutionary Conservation</text>
-
2QGM is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_cereus_atcc_14579 Bacillus cereus atcc 14579]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QGM OCA].
+
</jmolCheckbox>
-
[[Category: Bacillus cereus atcc 14579]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qgm ConSurf].
-
[[Category: Single protein]]
+
<div style="clear:both"></div>
-
[[Category: Abashidze, M.]]
+
__TOC__
-
[[Category: Acton, T B.]]
+
</StructureSection>
-
[[Category: Baran, M C.]]
+
[[Category: Baccr]]
-
[[Category: Fang, Y.]]
+
[[Category: Large Structures]]
-
[[Category: Hunt, J F.]]
+
[[Category: Abashidze, M]]
-
[[Category: Jayaraman, S.]]
+
[[Category: Acton, T B]]
-
[[Category: Kuzin, A P.]]
+
[[Category: Baran, M C]]
-
[[Category: Liu, J.]]
+
[[Category: Fang, Y]]
-
[[Category: Ma, L-C.]]
+
[[Category: Hunt, J F]]
-
[[Category: Maglaqui, M.]]
+
[[Category: Jayaraman, S]]
-
[[Category: Montelione, G T.]]
+
[[Category: Kuzin, A P]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Liu, J]]
-
[[Category: Rost, B.]]
+
[[Category: Ma, L C]]
-
[[Category: Tong, L.]]
+
[[Category: Maglaqui, M]]
-
[[Category: Wang, H.]]
+
[[Category: Montelione, G T]]
-
[[Category: Xiao, R.]]
+
[[Category: Structural genomic]]
-
[[Category: bcr136]]
+
[[Category: Rost, B]]
-
[[Category: nesg]]
+
[[Category: Tong, L]]
-
[[Category: northeast structural genomics consortium]]
+
[[Category: Wang, H]]
-
[[Category: protein structure initiative]]
+
[[Category: Xiao, R]]
-
[[Category: psi-2]]
+
[[Category: Bcr136]]
-
[[Category: q817z0]]
+
[[Category: Biosynthetic protein]]
-
[[Category: structural genomic]]
+
[[Category: Nesg]]
-
[[Category: x-ray]]
+
[[Category: PSI, Protein structure initiative]]
-
 
+
[[Category: Q817z0]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:49:07 2008''
+

Current revision

Crystal structure of succinoglycan biosynthesis protein at the resolution 1.7 A. Northeast Structural Genomics Consortium target BcR136.

PDB ID 2qgm

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools