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2qhq

From Proteopedia

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[[Image:2qhq.gif|left|200px]]
 
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{{Structure
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==Crystal structure of unknown function protein VPA0580==
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|PDB= 2qhq |SIZE=350|CAPTION= <scene name='initialview01'>2qhq</scene>, resolution 1.76&Aring;
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<StructureSection load='2qhq' size='340' side='right'caption='[[2qhq]], [[Resolution|resolution]] 1.76&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=MLY:N-DIMETHYL-LYSINE'>MLY</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
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<table><tr><td colspan='2'>[[2qhq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibpa Vibpa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QHQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QHQ FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene></td></tr>
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|GENE= VPA0580 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=223926 Vibrio parahaemolyticus RIMD 2210633])
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MLY:N-DIMETHYL-LYSINE'>MLY</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam08888 HopJ]</span>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VPA0580 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=223926 VIBPA])</td></tr>
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|RELATEDENTRY=
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qhq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qhq OCA], [https://pdbe.org/2qhq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qhq RCSB], [https://www.ebi.ac.uk/pdbsum/2qhq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qhq ProSAT], [https://www.topsan.org/Proteins/MCSG/2qhq TOPSAN]</span></td></tr>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qhq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qhq OCA], [http://www.ebi.ac.uk/pdbsum/2qhq PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2qhq RCSB]</span>
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</table>
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}}
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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'''Crystal structure of unknown function protein VPA0580'''
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qh/2qhq_consurf.spt"</scriptWhenChecked>
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==About this Structure==
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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2QHQ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Vibrio_parahaemolyticus_rimd_2210633 Vibrio parahaemolyticus rimd 2210633]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QHQ OCA].
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Single protein]]
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</jmolCheckbox>
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[[Category: Vibrio parahaemolyticus rimd 2210633]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qhq ConSurf].
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[[Category: Abdullah, J.]]
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<div style="clear:both"></div>
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[[Category: Chang, C.]]
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__TOC__
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[[Category: Joachimiak, A.]]
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</StructureSection>
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[[Category: Kim, Y.]]
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[[Category: Large Structures]]
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[[Category: MCSG, Midwest Center for Structural Genomics.]]
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[[Category: Vibpa]]
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[[Category: Volkart, L.]]
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[[Category: Abdullah, J]]
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[[Category: mcsg]]
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[[Category: Chang, C]]
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[[Category: midwest center for structural genomic]]
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[[Category: Joachimiak, A]]
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[[Category: protein structure initiative]]
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[[Category: Kim, Y]]
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[[Category: psi-2]]
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[[Category: Structural genomic]]
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[[Category: structural genomic]]
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[[Category: Volkart, L]]
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[[Category: unknown function]]
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[[Category: Mcsg]]
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[[Category: unknown function protein]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: vibrio parahaemolyticus]]
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[[Category: Unknown function]]
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[[Category: Unknown function protein]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:49:23 2008''
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[[Category: Vibrio parahaemolyticus]]

Current revision

Crystal structure of unknown function protein VPA0580

PDB ID 2qhq

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