This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2qm0
From Proteopedia
(Difference between revisions)
| (13 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2qm0.jpg|left|200px]] | ||
| - | + | ==Crystal structure of BES protein from Bacillus cereus== | |
| - | + | <StructureSection load='2qm0' size='340' side='right'caption='[[2qm0]], [[Resolution|resolution]] 1.84Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | | | + | <table><tr><td colspan='2'>[[2qm0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Baccr Baccr]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QM0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QM0 FirstGlance]. <br> |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | |
| - | | | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SVY:O-[BIS(1-METHYLETHOXY)PHOSPHORYL]-L-SERINE'>SVY</scene></td></tr> |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BC_3734 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=226900 BACCR])</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qm0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qm0 OCA], [https://pdbe.org/2qm0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qm0 RCSB], [https://www.ebi.ac.uk/pdbsum/2qm0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qm0 ProSAT], [https://www.topsan.org/Proteins/MCSG/2qm0 TOPSAN]</span></td></tr> | |
| - | + | </table> | |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | + | Check<jmol> | |
| - | + | <jmolCheckbox> | |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qm/2qm0_consurf.spt"</scriptWhenChecked> | |
| - | == | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | + | <text>to colour the structure by Evolutionary Conservation</text> | |
| - | [[Category: | + | </jmolCheckbox> |
| - | [[Category: | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qm0 ConSurf]. |
| - | [[Category: Holzle, D | + | <div style="clear:both"></div> |
| - | [[Category: Joachimiak, A | + | __TOC__ |
| - | [[Category: Kim, Y | + | </StructureSection> |
| - | [[Category: | + | [[Category: Baccr]] |
| - | [[Category: Maltseva, N | + | [[Category: Large Structures]] |
| - | [[Category: Zawadzka, A | + | [[Category: Holzle, D]] |
| - | [[Category: | + | [[Category: Joachimiak, A]] |
| - | [[Category: | + | [[Category: Kim, Y]] |
| - | [[Category: | + | [[Category: Structural genomic]] |
| - | + | [[Category: Maltseva, N]] | |
| - | [[Category: | + | [[Category: Zawadzka, A]] |
| - | + | [[Category: Alpha-beta structure]] | |
| - | + | [[Category: Mcsg]] | |
| - | + | [[Category: PSI, Protein structure initiative]] | |
| - | + | [[Category: Unknown function]] | |
Current revision
Crystal structure of BES protein from Bacillus cereus
| |||||||||||
