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2qpu
From Proteopedia
(Difference between revisions)
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==Sugar tongs mutant S378P in complex with acarbose== | ==Sugar tongs mutant S378P in complex with acarbose== | ||
| - | <StructureSection load='2qpu' size='340' side='right' caption='[[2qpu]], [[Resolution|resolution]] 1.70Å' scene=''> | + | <StructureSection load='2qpu' size='340' side='right'caption='[[2qpu]], [[Resolution|resolution]] 1.70Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2qpu]] is a 3 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2qpu]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Barley Barley]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QPU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QPU FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand= | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=QPU:1,5-ANHYDRO-4-O-(4,6-DIDEOXY-4-{[(1S,2S,3S,4R,5S,6R)-2,3,4,6-TETRAHYDROXY-5-METHYLCYCLOHEXYL]AMINO}-ALPHA-D-GLUCOPYRANOSYL)-D-GLUCITOL'>QPU</scene></td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1ht6|1ht6]], [[1p6w|1p6w]], [[1rpk|1rpk]], [[1rp8|1rp8]], [[1rp9|1rp9]], [[1amy|1amy]], [[2qps|2qps]]</td></tr> | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=AC1:6-METHYL-5-(4,5,6-TRIHYDROXY-3-HYDROXYMETHYL-CYCLOHEX-2-ENYLAMINO)-TETRAHYDRO-PYRAN-2,3,4-TRIOL'>AC1</scene></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AMY1.1 ([ | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1ht6|1ht6]], [[1p6w|1p6w]], [[1rpk|1rpk]], [[1rp8|1rp8]], [[1rp9|1rp9]], [[1amy|1amy]], [[2qps|2qps]]</div></td></tr> |
| - | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AMY1.1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4513 Barley])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Alpha-amylase Alpha-amylase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.1 3.2.1.1] </span></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qpu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qpu OCA], [https://pdbe.org/2qpu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qpu RCSB], [https://www.ebi.ac.uk/pdbsum/2qpu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qpu ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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==See Also== | ==See Also== | ||
| - | *[[Amylase|Amylase]] | + | *[[Amylase 3D structures|Amylase 3D structures]] |
== References == | == References == | ||
<references/> | <references/> | ||
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[[Category: Alpha-amylase]] | [[Category: Alpha-amylase]] | ||
[[Category: Barley]] | [[Category: Barley]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Aghajari, N]] | [[Category: Aghajari, N]] | ||
[[Category: Haser, R]] | [[Category: Haser, R]] | ||
Revision as of 08:28, 25 June 2021
Sugar tongs mutant S378P in complex with acarbose
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