This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2qs9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:31, 25 June 2021) (edit) (undo)
 
(17 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2qs9.jpg|left|200px]]
 
-
{{Structure
+
==Crystal structure of the human retinoblastoma-binding protein 9 (RBBP-9). NESG target HR2978==
-
|PDB= 2qs9 |SIZE=350|CAPTION= <scene name='initialview01'>2qs9</scene>, resolution 1.72&Aring;
+
<StructureSection load='2qs9' size='340' side='right'caption='[[2qs9]], [[Resolution|resolution]] 1.72&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+
<table><tr><td colspan='2'>[[2qs9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QS9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QS9 FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
|GENE= RBBP9, BOG, RBBP10 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RBBP9, BOG, RBBP10 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG3545 COG3545]</span>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qs9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qs9 OCA], [https://pdbe.org/2qs9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qs9 RCSB], [https://www.ebi.ac.uk/pdbsum/2qs9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qs9 ProSAT], [https://www.topsan.org/Proteins/NESGC/2qs9 TOPSAN]</span></td></tr>
-
|RELATEDENTRY=
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qs9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qs9 OCA], [http://www.ebi.ac.uk/pdbsum/2qs9 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2qs9 RCSB]</span>
+
== Function ==
-
}}
+
[[https://www.uniprot.org/uniprot/RBBP9_HUMAN RBBP9_HUMAN]] May play a role in the transformation process due to its capacity to confer resistance to the growth-inhibitory effects of TGF-beta1 through interaction with retinoblastoma and the subsequent displacement of E2F-1.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qs/2qs9_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qs9 ConSurf].
 +
<div style="clear:both"></div>
-
'''Crystal structure of the human retinoblastoma-binding protein 9 (RBBP-9). NESG target HR2978'''
+
==See Also==
-
 
+
*[[Retinoblastoma-binding protein 3D structures|Retinoblastoma-binding protein 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
2QS9 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QS9 OCA].
+
[[Category: Human]]
-
[[Category: Homo sapiens]]
+
[[Category: Large Structures]]
-
[[Category: Single protein]]
+
[[Category: Acton, T B]]
-
[[Category: Acton, T B.]]
+
[[Category: Chen, C X]]
-
[[Category: Chen, C X.]]
+
[[Category: Cunningham, K]]
-
[[Category: Cunningham, K.]]
+
[[Category: Hunt, J F]]
-
[[Category: Hunt, J F.]]
+
[[Category: Kuzin, A]]
-
[[Category: Kuzin, A.]]
+
[[Category: Maglaqui, M]]
-
[[Category: Maglaqui, M.]]
+
[[Category: Montelione, G T]]
-
[[Category: Montelione, G T.]]
+
[[Category: Structural genomic]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Owens, L]]
-
[[Category: Owens, L.]]
+
[[Category: Seetharaman, J]]
-
[[Category: Seetharaman, J.]]
+
[[Category: Su, M]]
-
[[Category: Su, M.]]
+
[[Category: Tong, L]]
-
[[Category: Tong, L.]]
+
[[Category: Vorobiev, S M]]
-
[[Category: Vorobiev, S M.]]
+
[[Category: Xiao, R]]
-
[[Category: Xiao, R.]]
+
[[Category: Alternative splicing]]
-
[[Category: alternative splicing]]
+
[[Category: B5t overexpressed gene protein]]
-
[[Category: b5t overexpressed gene protein]]
+
[[Category: Bog]]
-
[[Category: bog]]
+
[[Category: Cytoplasm]]
-
[[Category: cytoplasm]]
+
[[Category: Hr2978]]
-
[[Category: hr2978]]
+
[[Category: Nesg]]
-
[[Category: nesg]]
+
[[Category: Nucleus]]
-
[[Category: northeast structural genomics consortium]]
+
[[Category: Phosphorylation]]
-
[[Category: nucleus]]
+
[[Category: PSI, Protein structure initiative]]
-
[[Category: phosphorylation]]
+
[[Category: Rbbp10]]
-
[[Category: protein structure initiative]]
+
[[Category: Rbbp9]]
-
[[Category: psi-2]]
+
[[Category: Retinoblastoma-binding protein 10]]
-
[[Category: rbbp10]]
+
[[Category: Retinoblastoma-binding protein 9]]
-
[[Category: rbbp9]]
+
[[Category: Structural protein]]
-
[[Category: retinoblastoma-binding protein 10]]
+
-
[[Category: retinoblastoma-binding protein 9]]
+
-
[[Category: structural genomic]]
+
-
[[Category: structural protein]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:52:52 2008''
+

Current revision

Crystal structure of the human retinoblastoma-binding protein 9 (RBBP-9). NESG target HR2978

PDB ID 2qs9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools