This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2qyb
From Proteopedia
(Difference between revisions)
| (8 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | {{Seed}} | ||
| - | [[Image:2qyb.png|left|200px]] | ||
| - | + | ==Crystal structure of the GAF domain region of putative membrane protein from Geobacter sulfurreducens PCA== | |
| - | + | <StructureSection load='2qyb' size='340' side='right'caption='[[2qyb]], [[Resolution|resolution]] 2.40Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2qyb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Geosl Geosl]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QYB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QYB FirstGlance]. <br> | |
| - | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GSU1429 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243231 GEOSL])</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qyb OCA], [https://pdbe.org/2qyb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qyb RCSB], [https://www.ebi.ac.uk/pdbsum/2qyb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qyb ProSAT], [https://www.topsan.org/Proteins/MCSG/2qyb TOPSAN]</span></td></tr> | |
| - | + | </table> | |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | + | Check<jmol> | |
| - | == | + | <jmolCheckbox> |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qy/2qyb_consurf.spt"</scriptWhenChecked> | |
| - | [[Category: | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: Clancy, S | + | </jmolCheckbox> |
| - | [[Category: Duggan, E | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qyb ConSurf]. |
| - | [[Category: Joachimiak, A | + | <div style="clear:both"></div> |
| - | [[Category: | + | __TOC__ |
| - | [[Category: Nocek, B | + | </StructureSection> |
| + | [[Category: Geosl]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Clancy, S]] | ||
| + | [[Category: Duggan, E]] | ||
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Nocek, B]] | ||
[[Category: Domain of putative membrane protein]] | [[Category: Domain of putative membrane protein]] | ||
[[Category: Gaf domain]] | [[Category: Gaf domain]] | ||
[[Category: Mcsg]] | [[Category: Mcsg]] | ||
| - | [[Category: | + | [[Category: Membrane protein]] |
| - | [[Category: Protein structure initiative]] | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal structure of the GAF domain region of putative membrane protein from Geobacter sulfurreducens PCA
| |||||||||||
