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2ra2
From Proteopedia
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==X-Ray structure of the Q7CPV8 protein from Salmonella typhimurium at the resolution 1.9 A. Northeast Structural Genomics Consortium target StR88A== | ==X-Ray structure of the Q7CPV8 protein from Salmonella typhimurium at the resolution 1.9 A. Northeast Structural Genomics Consortium target StR88A== | ||
| - | <StructureSection load='2ra2' size='340' side='right' caption='[[2ra2]], [[Resolution|resolution]] 1.90Å' scene=''> | + | <StructureSection load='2ra2' size='340' side='right'caption='[[2ra2]], [[Resolution|resolution]] 1.90Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2ra2]] is a 6 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2ra2]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Salty Salty]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RA2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RA2 FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2jn0|2jn0]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2jn0|2jn0]]</div></td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ygdI, STM2983 ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ygdI, STM2983 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=99287 SALTY])</td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ra2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ra2 OCA], [https://pdbe.org/2ra2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ra2 RCSB], [https://www.ebi.ac.uk/pdbsum/2ra2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ra2 ProSAT], [https://www.topsan.org/Proteins/NESGC/2ra2 TOPSAN]</span></td></tr> |
| - | <table> | + | </table> |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ra/2ra2_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ra/2ra2_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ra2 ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Acton, T B | + | [[Category: Salty]] |
| - | [[Category: Baran, M C | + | [[Category: Acton, T B]] |
| - | [[Category: Cunningham, K | + | [[Category: Baran, M C]] |
| - | [[Category: Hunt, J F | + | [[Category: Cunningham, K]] |
| - | [[Category: Kuzin, A P | + | [[Category: Hunt, J F]] |
| - | [[Category: Liu, J | + | [[Category: Kuzin, A P]] |
| - | [[Category: Mao, L | + | [[Category: Liu, J]] |
| - | [[Category: Montelione, G T | + | [[Category: Mao, L]] |
| - | [[Category: | + | [[Category: Montelione, G T]] |
| - | [[Category: Rost, B | + | [[Category: Structural genomic]] |
| - | [[Category: Seetharaman, J | + | [[Category: Rost, B]] |
| - | [[Category: Su, M | + | [[Category: Seetharaman, J]] |
| - | [[Category: Tong, L | + | [[Category: Su, M]] |
| - | [[Category: Vorobiev, S M | + | [[Category: Tong, L]] |
| - | [[Category: Wang, H | + | [[Category: Vorobiev, S M]] |
| - | [[Category: Xiao, R | + | [[Category: Wang, H]] |
| + | [[Category: Xiao, R]] | ||
[[Category: Lipoprotein]] | [[Category: Lipoprotein]] | ||
[[Category: Nesg]] | [[Category: Nesg]] | ||
| - | [[Category: | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
| - | + | ||
[[Category: Q7cpv8]] | [[Category: Q7cpv8]] | ||
[[Category: Str88a]] | [[Category: Str88a]] | ||
| - | [[Category: Structural genomic]] | ||
[[Category: Unknown function]] | [[Category: Unknown function]] | ||
Current revision
X-Ray structure of the Q7CPV8 protein from Salmonella typhimurium at the resolution 1.9 A. Northeast Structural Genomics Consortium target StR88A
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Categories: Large Structures | Salty | Acton, T B | Baran, M C | Cunningham, K | Hunt, J F | Kuzin, A P | Liu, J | Mao, L | Montelione, G T | Structural genomic | Rost, B | Seetharaman, J | Su, M | Tong, L | Vorobiev, S M | Wang, H | Xiao, R | Lipoprotein | Nesg | PSI, Protein structure initiative | Q7cpv8 | Str88a | Unknown function
