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2rkb
From Proteopedia
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==Serine dehydratase like-1 from human cancer cells== | ==Serine dehydratase like-1 from human cancer cells== | ||
| - | <StructureSection load='2rkb' size='340' side='right' caption='[[2rkb]], [[Resolution|resolution]] 2.80Å' scene=''> | + | <StructureSection load='2rkb' size='340' side='right'caption='[[2rkb]], [[Resolution|resolution]] 2.80Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2rkb]] is a 5 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2rkb]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RKB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RKB FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>< | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rkb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rkb OCA], [https://pdbe.org/2rkb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rkb RCSB], [https://www.ebi.ac.uk/pdbsum/2rkb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rkb ProSAT]</span></td></tr> |
| - | <table> | + | </table> |
| + | == Function == | ||
| + | [[https://www.uniprot.org/uniprot/SDSL_HUMAN SDSL_HUMAN]] Has low serine dehydratase and threonine dehydratase activity. | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rk/2rkb_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rk/2rkb_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2rkb ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
| + | <div class="pdbe-citations 2rkb" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[Deaminase|Deaminase]] | + | *[[Deaminase 3D structures|Deaminase 3D structures]] |
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Human]] |
| - | [[Category: Kasuya, T | + | [[Category: Large Structures]] |
| - | [[Category: Komoto, J | + | [[Category: Kasuya, T]] |
| - | [[Category: Mori, H | + | [[Category: Komoto, J]] |
| - | [[Category: Ogawa, H | + | [[Category: Mori, H]] |
| - | [[Category: Takusagawa, F | + | [[Category: Ogawa, H]] |
| - | [[Category: Yamada, T | + | [[Category: Takusagawa, F]] |
| + | [[Category: Yamada, T]] | ||
[[Category: Enzyme found in human cancer cell]] | [[Category: Enzyme found in human cancer cell]] | ||
[[Category: Lyase]] | [[Category: Lyase]] | ||
Current revision
Serine dehydratase like-1 from human cancer cells
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