This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
Heat shock factor
From Proteopedia
(Difference between revisions)
| (5 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | <StructureSection load='3hts' size='400' side='right' caption='Structure | + | <StructureSection load='3hts' size='400' side='right' caption='Structure the dimeric heat shock protein complex with DNA and glycerol (PDB entry [[3hts]])' scene='51/516471/Cv/3'> |
== Function == | == Function == | ||
| - | '''Heat shock factor''' (HSF) are transcriptional activators of heat shock genes. HSF bind to heat shock sequence elements throughout the genome with a consensus array of three oppositely oriented sequence AGGAN and activate transcription. Each HSF monomer contains one C-terminal and 3 N-terminal leucine zippers. Two sequences flanking the N-terminal leucine zippers contain the consensus nuclear localization signal (NLS). The DNA-binding domain (DBD) of HSF lies in the N-terminal of the first NLS region<ref>PMID:8441385</ref>. | + | '''Heat shock factor''' (HSF) are transcriptional activators of heat shock genes. HSF bind to heat shock sequence elements throughout the genome with a consensus array of three oppositely oriented sequence AGGAN and activate transcription. Each HSF monomer contains one C-terminal and 3 N-terminal leucine zippers. Two sequences flanking the N-terminal leucine zippers contain the consensus nuclear localization signal (NLS). The DNA-binding domain (DBD residues 193-281) of HSF lies in the N-terminal of the first NLS region<ref>PMID:8441385</ref>. |
== Relevance == | == Relevance == | ||
| Line 8: | Line 8: | ||
== Structural highlights == | == Structural highlights == | ||
| - | The DBD region of HSF shows <scene name='51/516471/Cv/ | + | The DBD region of HSF shows <scene name='51/516471/Cv/4'>multiple protein-DNA interactions as well as water-mediated interactions</scene> <ref>PMID:10331875</ref>. Water molecules shown as red spheres. |
==3D structures of heat shock factor== | ==3D structures of heat shock factor== | ||
| Line 14: | Line 14: | ||
Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} | Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} | ||
| - | [[ | + | [[2ldu]] – hHSF-1 DBD residues 193-281 – human - NMR<br /> |
| - | [[ | + | [[5hdg]] – hHSF-1 DBD <br /> |
| + | [[5d5u]], [[5d5v]], [[5hdn]], [[7dcj]], [[7dcs]], [[7dct]] – hHSF-1 DBD + DNA<br /> | ||
| + | [[5hdk]] – hHSF-2 DBD <br /> | ||
| + | [[5d8k]], [[5d8l]], [[7dci]], [[7dcu]] – hHSF-2 DBD + DNA<br /> | ||
| + | [[6j6v]] – hHSF-4 DBD <br /> | ||
| + | [[6j6w]] – hHSF-4 DBD (mutant)<br /> | ||
[[2hts]], [[1fbu]] – KlHSF DBD – ''Kluyveromyces lactis''<br /> | [[2hts]], [[1fbu]] – KlHSF DBD – ''Kluyveromyces lactis''<br /> | ||
[[3htf]], [[1fbq]], [[1fbs]] – KlHSF DBD (mutant) <br /> | [[3htf]], [[1fbq]], [[1fbs]] – KlHSF DBD (mutant) <br /> | ||
| + | [[3hsf]] - KlHSF DBD (mutant) – NMR<br /> | ||
[[3hts]] – KlHSF DBD + DNA<br /> | [[3hts]] – KlHSF DBD + DNA<br /> | ||
| - | [[1fyk]], [[1fyl]], [[1fym]] – KlHSF DBD (mutant) + DNA | + | [[1fyk]], [[1fyl]], [[1fym]] – KlHSF DBD (mutant) + DNA<br /> |
| + | [[1hks]], [[1hkt]] – HSF DBD – ''Drosophila melanogaster'' – NMR<br /> | ||
== References == | == References == | ||
<references/> | <references/> | ||
[[Category:Topic Page]] | [[Category:Topic Page]] | ||
Current revision
| |||||||||||
