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3hfq
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 3hfq is ON HOLD Authors: Vorobiev,S.M., Scott,L., Schauder,S., Xiao,R., Ciccosanti,C., Foote,E.L., Maglaqui,M., Everett J.K., Nair, R., Acton T.B., ...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of the lp_2219 protein from Lactobacillus plantarum. Northeast Structural Genomics Consortium Target LpR118.== | |
| - | + | <StructureSection load='3hfq' size='340' side='right'caption='[[3hfq]], [[Resolution|resolution]] 1.96Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3hfq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"lactobacillus_arabinosus"_fred_et_al. "lactobacillus arabinosus" fred et al.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HFQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HFQ FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> | |
| - | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lp_2219 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1590 "Lactobacillus arabinosus" Fred et al.])</td></tr> | |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hfq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hfq OCA], [https://pdbe.org/3hfq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hfq RCSB], [https://www.ebi.ac.uk/pdbsum/3hfq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hfq ProSAT], [https://www.topsan.org/Proteins/NESGC/3hfq TOPSAN]</span></td></tr> | ||
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hf/3hfq_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hfq ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Lactobacillus arabinosus fred et al]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Acton, T B]] | ||
| + | [[Category: Ciccosanti, C]] | ||
| + | [[Category: Everett, J K]] | ||
| + | [[Category: Foote, E L]] | ||
| + | [[Category: Hunt, J F]] | ||
| + | [[Category: Maglaqui, M]] | ||
| + | [[Category: Montelione, G T]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Nair, R]] | ||
| + | [[Category: Rost, B]] | ||
| + | [[Category: Schauder, C]] | ||
| + | [[Category: Scott, L]] | ||
| + | [[Category: Tong, L]] | ||
| + | [[Category: Vorobiev, S M]] | ||
| + | [[Category: Xiao, R]] | ||
| + | [[Category: Lp_2219]] | ||
| + | [[Category: Lpr118]] | ||
| + | [[Category: Nesg]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
| + | [[Category: Q88v64_lacpl]] | ||
| + | [[Category: Unknown function]] | ||
Current revision
Crystal structure of the lp_2219 protein from Lactobacillus plantarum. Northeast Structural Genomics Consortium Target LpR118.
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Categories: Lactobacillus arabinosus fred et al | Large Structures | Acton, T B | Ciccosanti, C | Everett, J K | Foote, E L | Hunt, J F | Maglaqui, M | Montelione, G T | Structural genomic | Nair, R | Rost, B | Schauder, C | Scott, L | Tong, L | Vorobiev, S M | Xiao, R | Lp 2219 | Lpr118 | Nesg | PSI, Protein structure initiative | Q88v64 lacpl | Unknown function
