This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3iiu
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==Structure of the reconstituted Peridinin-Chlorophyll a-Protein (RFPCP) mutant N89L== | ==Structure of the reconstituted Peridinin-Chlorophyll a-Protein (RFPCP) mutant N89L== | ||
| - | <StructureSection load='3iiu' size='340' side='right' caption='[[3iiu]], [[Resolution|resolution]] 1.45Å' scene=''> | + | <StructureSection load='3iiu' size='340' side='right'caption='[[3iiu]], [[Resolution|resolution]] 1.45Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3iiu]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3iiu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Ampca Ampca]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IIU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IIU FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CLA:CHLOROPHYLL+A'>CLA</scene>, <scene name='pdbligand=J7Z:(2S)-3-[(6-O-ALPHA-D-GALACTOPYRANOSYL-BETA-D-GALACTOPYRANOSYL)OXY]-2-[(3Z,6Z,9Z,12Z,15Z)-OCTADECA-3,6,9,12,15-PENTAENOYLOXY]PROPYL+(5Z,8Z,11Z,14Z,17Z)-ICOSA-5,8,11,14,17-PENTAENOATE'>J7Z</scene>, <scene name='pdbligand=PID:PERIDININ'>PID</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CLA:CHLOROPHYLL+A'>CLA</scene>, <scene name='pdbligand=J7Z:(2S)-3-[(6-O-ALPHA-D-GALACTOPYRANOSYL-BETA-D-GALACTOPYRANOSYL)OXY]-2-[(3Z,6Z,9Z,12Z,15Z)-OCTADECA-3,6,9,12,15-PENTAENOYLOXY]PROPYL+(5Z,8Z,11Z,14Z,17Z)-ICOSA-5,8,11,14,17-PENTAENOATE'>J7Z</scene>, <scene name='pdbligand=PID:PERIDININ'>PID</scene></td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1ppr|1ppr]], [[2c9e|2c9e]], [[3iis|3iis]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1ppr|1ppr]], [[2c9e|2c9e]], [[3iis|3iis]]</div></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PCP ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PCP ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2961 AMPCA])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3iiu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iiu OCA], [https://pdbe.org/3iiu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3iiu RCSB], [https://www.ebi.ac.uk/pdbsum/3iiu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3iiu ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [[ | + | [[https://www.uniprot.org/uniprot/PCP1_AMPCA PCP1_AMPCA]] Water-soluble antenna for capture of solar energy in the blue-green range. Peridinin is an asymmetric carotenoid. |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
| Line 35: | Line 35: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Ampca]] | [[Category: Ampca]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Hofmann, E]] | [[Category: Hofmann, E]] | ||
[[Category: Schulte, T]] | [[Category: Schulte, T]] | ||
Revision as of 12:11, 13 October 2021
Structure of the reconstituted Peridinin-Chlorophyll a-Protein (RFPCP) mutant N89L
| |||||||||||

