This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3k7x
From Proteopedia
(Difference between revisions)
| (4 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | {{STRUCTURE_3k7x| PDB=3k7x | SCENE= }} | ||
| - | ===Crystal structure of the Lin0763 protein from Listeria innocua. Northeast Structural Genomics Consortium Target LkR23.=== | ||
| - | == | + | ==Crystal structure of the Lin0763 protein from Listeria innocua. Northeast Structural Genomics Consortium Target LkR23.== |
| - | [[3k7x]] is a 1 chain structure with sequence from [ | + | <StructureSection load='3k7x' size='340' side='right'caption='[[3k7x]], [[Resolution|resolution]] 1.89Å' scene=''> |
| - | [[Category: Listeria innocua]] | + | == Structural highlights == |
| - | [[Category: Acton, T B | + | <table><tr><td colspan='2'>[[3k7x]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"listeria_innocua"_seeliger_and_schoofs_1979 "listeria innocua" seeliger and schoofs 1979]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K7X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3K7X FirstGlance]. <br> |
| - | [[Category: Buchwald, W A | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> |
| - | [[Category: Ciccosanti, C | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | [[Category: Hunt, J F | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lin0763 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1642 "Listeria innocua" Seeliger and Schoofs 1979])</td></tr> |
| - | [[Category: Maglaqui, M | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3k7x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k7x OCA], [https://pdbe.org/3k7x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3k7x RCSB], [https://www.ebi.ac.uk/pdbsum/3k7x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3k7x ProSAT]</span></td></tr> |
| - | [[Category: Montelione, G T | + | </table> |
| - | [[Category: | + | == Evolutionary Conservation == |
| - | [[Category: Sahdev, S | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[Category: Seetharaman, J | + | Check<jmol> |
| - | [[Category: Su, M | + | <jmolCheckbox> |
| - | [[Category: Tong, L | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k7/3k7x_consurf.spt"</scriptWhenChecked> |
| - | [[Category: Vorobiev, S | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: Xiao, R | + | <text>to colour the structure by Evolutionary Conservation</text> |
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3k7x ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Listeria innocua seeliger and schoofs 1979]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Acton, T B]] | ||
| + | [[Category: Buchwald, W A]] | ||
| + | [[Category: Ciccosanti, C]] | ||
| + | [[Category: Hunt, J F]] | ||
| + | [[Category: Maglaqui, M]] | ||
| + | [[Category: Montelione, G T]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Sahdev, S]] | ||
| + | [[Category: Seetharaman, J]] | ||
| + | [[Category: Su, M]] | ||
| + | [[Category: Tong, L]] | ||
| + | [[Category: Vorobiev, S]] | ||
| + | [[Category: Xiao, R]] | ||
[[Category: Lin0763]] | [[Category: Lin0763]] | ||
[[Category: Lkr23]] | [[Category: Lkr23]] | ||
[[Category: Nesg]] | [[Category: Nesg]] | ||
| - | [[Category: | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
| - | + | ||
[[Category: Q92dq0]] | [[Category: Q92dq0]] | ||
| - | [[Category: Structural genomic]] | ||
[[Category: Unknown function]] | [[Category: Unknown function]] | ||
Current revision
Crystal structure of the Lin0763 protein from Listeria innocua. Northeast Structural Genomics Consortium Target LkR23.
| |||||||||||
Categories: Listeria innocua seeliger and schoofs 1979 | Large Structures | Acton, T B | Buchwald, W A | Ciccosanti, C | Hunt, J F | Maglaqui, M | Montelione, G T | Structural genomic | Sahdev, S | Seetharaman, J | Su, M | Tong, L | Vorobiev, S | Xiao, R | Lin0763 | Lkr23 | Nesg | PSI, Protein structure initiative | Q92dq0 | Unknown function
