This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3ljk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:35, 13 October 2021) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3ljk.jpg|left|200px]]
 
-
<!--
+
==Glucose-6-phosphate isomerase from Francisella tularensis.==
-
The line below this paragraph, containing "STRUCTURE_3ljk", creates the "Structure Box" on the page.
+
<StructureSection load='3ljk' size='340' side='right'caption='[[3ljk]], [[Resolution|resolution]] 1.48&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3ljk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"francisella_tularensis_subsp._nearctica"_olsufjev_1970 "francisella tularensis subsp. nearctica" olsufjev 1970]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LJK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LJK FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IPA:ISOPROPYL+ALCOHOL'>IPA</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene></td></tr>
-
-->
+
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_3ljk| PDB=3ljk | SCENE= }}
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">FTT1315c, pgi ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=119856 "Francisella tularensis subsp. nearctica" Olsufjev 1970])</td></tr>
 +
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Glucose-6-phosphate_isomerase Glucose-6-phosphate isomerase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.1.9 5.3.1.9] </span></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ljk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ljk OCA], [https://pdbe.org/3ljk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ljk RCSB], [https://www.ebi.ac.uk/pdbsum/3ljk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ljk ProSAT]</span></td></tr>
 +
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lj/3ljk_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ljk ConSurf].
 +
<div style="clear:both"></div>
-
===Glucose-6-phosphate isomerase from Francisella tularensis.===
+
==See Also==
-
 
+
*[[Phosphoglucose isomerase 3D structures|Phosphoglucose isomerase 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
3LJK is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Francisella_tularensis Francisella tularensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LJK OCA].
+
[[Category: Francisella tularensis subsp. nearctica olsufjev 1970]]
-
[[Category: Francisella tularensis]]
+
[[Category: Glucose-6-phosphate isomerase]]
[[Category: Glucose-6-phosphate isomerase]]
-
[[Category: Anderson, W F.]]
+
[[Category: Large Structures]]
-
[[Category: CSGID, Structural Genomics of Infectious Diseases.]]
+
[[Category: Anderson, W F]]
-
[[Category: Hasseman, J.]]
+
[[Category: Structural genomic]]
-
[[Category: Joachimiak, A.]]
+
[[Category: Hasseman, J]]
-
[[Category: Maltseva, N.]]
+
[[Category: Joachimiak, A]]
-
[[Category: Osipiuk, J.]]
+
[[Category: Maltseva, N]]
-
[[Category: Center for structural genomics of infectious disease]]
+
[[Category: Osipiuk, J]]
[[Category: Csgid]]
[[Category: Csgid]]
[[Category: Cytoplasm]]
[[Category: Cytoplasm]]
Line 31: Line 41:
[[Category: Idp02733]]
[[Category: Idp02733]]
[[Category: Isomerase]]
[[Category: Isomerase]]
-
[[Category: Structural genomic]]
 
- 
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 17 09:44:16 2010''
 

Current revision

Glucose-6-phosphate isomerase from Francisella tularensis.

PDB ID 3ljk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools