This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3b55

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (18:53, 20 October 2021) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3b55.gif|left|200px]]
 
-
<!--
+
==Crystal structure of the Q81BN2_BACCR protein from Bacillus cereus. NESG target BcR135==
-
The line below this paragraph, containing "STRUCTURE_3b55", creates the "Structure Box" on the page.
+
<StructureSection load='3b55' size='340' side='right'caption='[[3b55]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3b55]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Baccr Baccr]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3B55 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3B55 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
-
-->
+
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_3b55| PDB=3b55 | SCENE= }}
+
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2rad|2rad]]</div></td></tr>
-
 
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BC_3120 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=226900 BACCR])</td></tr>
-
'''Crystal structure of the Q81BN2_BACCR protein from Bacillus cereus. NESG target BcR135'''
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3b55 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3b55 OCA], [https://pdbe.org/3b55 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3b55 RCSB], [https://www.ebi.ac.uk/pdbsum/3b55 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3b55 ProSAT], [https://www.topsan.org/Proteins/NESGC/3b55 TOPSAN]</span></td></tr>
-
 
+
</table>
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
3B55 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_cereus_atcc_14579 Bacillus cereus atcc 14579]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3B55 OCA].
+
Check<jmol>
-
[[Category: Bacillus cereus atcc 14579]]
+
<jmolCheckbox>
-
[[Category: Single protein]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/b5/3b55_consurf.spt"</scriptWhenChecked>
-
[[Category: Acton, T B.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Chen, Y.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Cunningham, K.]]
+
</jmolCheckbox>
-
[[Category: Hunt, J F.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3b55 ConSurf].
-
[[Category: Kuzin, A P.]]
+
<div style="clear:both"></div>
-
[[Category: Maglaqui, M.]]
+
__TOC__
-
[[Category: Montelione, G T.]]
+
</StructureSection>
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Baccr]]
-
[[Category: Owens, L.]]
+
[[Category: Large Structures]]
-
[[Category: Seetharaman, J.]]
+
[[Category: Acton, T B]]
-
[[Category: Tong, L.]]
+
[[Category: Chen, Y]]
-
[[Category: Vorobiev, S M.]]
+
[[Category: Cunningham, K]]
-
[[Category: Wang, H.]]
+
[[Category: Hunt, J F]]
-
[[Category: Xiao, R.]]
+
[[Category: Kuzin, A P]]
 +
[[Category: Maglaqui, M]]
 +
[[Category: Montelione, G T]]
 +
[[Category: Structural genomic]]
 +
[[Category: Owens, L]]
 +
[[Category: Seetharaman, J]]
 +
[[Category: Tong, L]]
 +
[[Category: Vorobiev, S M]]
 +
[[Category: Wang, H]]
 +
[[Category: Xiao, R]]
[[Category: Bcr135]]
[[Category: Bcr135]]
[[Category: Biosynthetic protein]]
[[Category: Biosynthetic protein]]
[[Category: Nesg]]
[[Category: Nesg]]
-
[[Category: Northeast structural genomics consortium]]
+
[[Category: PSI, Protein structure initiative]]
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
[[Category: Q81bn2]]
[[Category: Q81bn2]]
-
[[Category: Structural genomic]]
 
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 20:24:08 2008''
 

Current revision

Crystal structure of the Q81BN2_BACCR protein from Bacillus cereus. NESG target BcR135

PDB ID 3b55

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3b55"
Personal tools