This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3d0c

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (19:17, 20 October 2021) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3d0c.png|left|200px]]
 
-
<!--
+
==Crystal structure of dihydrodipicolinate synthase from Oceanobacillus iheyensis at 1.9 A resolution==
-
The line below this paragraph, containing "STRUCTURE_3d0c", creates the "Structure Box" on the page.
+
<StructureSection load='3d0c' size='340' side='right'caption='[[3d0c]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D0C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3D0C FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3d0c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d0c OCA], [https://pdbe.org/3d0c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3d0c RCSB], [https://www.ebi.ac.uk/pdbsum/3d0c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3d0c ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3d0c TOPSAN]</span></td></tr>
-
-->
+
</table>
-
{{STRUCTURE_3d0c| PDB=3d0c | SCENE= }}
+
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d0/3d0c_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3d0c ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal structure of dihydrodipicolinate synthase from Oceanobacillus iheyensis at 1.9 A resolution===
+
==See Also==
-
 
+
*[[Dihydrodipicolinate synthase|Dihydrodipicolinate synthase]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
3D0C is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Oceanobacillus_iheyensis_hte831 Oceanobacillus iheyensis hte831]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D0C OCA].
+
[[Category: Large Structures]]
-
[[Category: Dihydrodipicolinate synthase]]
+
[[Category: Burley SK]]
-
[[Category: Oceanobacillus iheyensis hte831]]
+
[[Category: Eswaramoorthy S]]
-
[[Category: Burley, S K.]]
+
[[Category: Satyanarayana L]]
-
[[Category: Eswaramoorthy, S.]]
+
[[Category: Sauder JM]]
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+
[[Category: Swaminathan S]]
-
[[Category: Satyanarayana, L.]]
+
-
[[Category: Sauder, J M.]]
+
-
[[Category: Swaminathan, S.]]
+
-
[[Category: 9375o]]
+
-
[[Category: Lyase]]
+
-
[[Category: Lysine biosynthesis]]
+
-
[[Category: New york sgx research center for structural genomic]]
+
-
[[Category: Nysgxrc]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Pyruvate]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Tim barrel]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 08:02:01 2009''
+

Current revision

Crystal structure of dihydrodipicolinate synthase from Oceanobacillus iheyensis at 1.9 A resolution

PDB ID 3d0c

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools