This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2v37

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (20:57, 20 October 2021) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
==SOLUTION STRUCTURE OF THE N-TERMINAL EXTRACELLULAR DOMAIN OF HUMAN T-CADHERIN==
+
 
-
<StructureSection load='2v37' size='340' side='right' caption='[[2v37]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
+
==Solution structure of the N-terminal extracellular domain of human T- cadherin==
 +
<StructureSection load='2v37' size='340' side='right'caption='[[2v37]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2v37]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V37 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2V37 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2v37]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V37 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2V37 FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2v37 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v37 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2v37 RCSB], [http://www.ebi.ac.uk/pdbsum/2v37 PDBsum]</span></td></tr>
+
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2v37 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v37 OCA], [https://pdbe.org/2v37 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2v37 RCSB], [https://www.ebi.ac.uk/pdbsum/2v37 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2v37 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/CAD13_HUMAN CAD13_HUMAN]] Cadherins are calcium-dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells; cadherins may thus contribute to the sorting of heterogeneous cell types. May act as a negative regulator of neural cell growth.<ref>PMID:10737605</ref>
+
[[https://www.uniprot.org/uniprot/CAD13_HUMAN CAD13_HUMAN]] Cadherins are calcium-dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells; cadherins may thus contribute to the sorting of heterogeneous cell types. May act as a negative regulator of neural cell growth.<ref>PMID:10737605</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v3/2v37_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v3/2v37_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2v37 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 25: Line 26:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 2v37" style="background-color:#fffaf0;"></div>
==See Also==
==See Also==
-
*[[Cadherin|Cadherin]]
+
*[[Cadherin 3D structures|Cadherin 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Homo sapiens]]
+
[[Category: Human]]
 +
[[Category: Large Structures]]
[[Category: Ahrens, T]]
[[Category: Ahrens, T]]
[[Category: Bang, E J]]
[[Category: Bang, E J]]
Line 39: Line 42:
[[Category: Haeussinger, D]]
[[Category: Haeussinger, D]]
[[Category: Adiponectin receptor]]
[[Category: Adiponectin receptor]]
 +
[[Category: Calcium]]
[[Category: Cell adhesion]]
[[Category: Cell adhesion]]
[[Category: Cell-cell adhesion]]
[[Category: Cell-cell adhesion]]
Line 48: Line 52:
[[Category: Lipoprotein]]
[[Category: Lipoprotein]]
[[Category: Membrane]]
[[Category: Membrane]]
 +
[[Category: Polymorphism]]
[[Category: T-cadherin]]
[[Category: T-cadherin]]

Current revision

Solution structure of the N-terminal extracellular domain of human T- cadherin

PDB ID 2v37

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools