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2yzo
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="2yzo" size="350" color="white" frame="true" align="right" spinBox="true" caption="2yzo, resolution 1.85Å" /> '''Crystal structure of...) |
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| - | [[Image:2yzo.jpg|left|200px]]<br /><applet load="2yzo" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2yzo, resolution 1.85Å" /> | ||
| - | '''Crystal structure of uncharacterized conserved protein from Thermotoga maritima'''<br /> | ||
| - | == | + | ==Crystal structure of uncharacterized conserved protein from Thermotoga maritima== |
| - | + | <StructureSection load='2yzo' size='340' side='right'caption='[[2yzo]], [[Resolution|resolution]] 1.85Å' scene=''> | |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[2yzo]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thema Thema]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YZO FirstGlance]. <br> | ||
| + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MLT:D-MALATE'>MLT</scene></td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">comB ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243274 THEMA])</td></tr> | ||
| + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/2-phosphosulfolactate_phosphatase 2-phosphosulfolactate phosphatase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.3.71 3.1.3.71] </span></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yzo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yzo OCA], [https://pdbe.org/2yzo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yzo RCSB], [https://www.ebi.ac.uk/pdbsum/2yzo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yzo ProSAT], [https://www.topsan.org/Proteins/RSGI/2yzo TOPSAN]</span></td></tr> | ||
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yz/2yzo_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2yzo ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: 2-phosphosulfolactate phosphatase]] | [[Category: 2-phosphosulfolactate phosphatase]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Thema]] |
| - | [[Category: Bessho, Y | + | [[Category: Bessho, Y]] |
| - | [[Category: Kuramitsu, S | + | [[Category: Kuramitsu, S]] |
| - | [[Category: Nakagawa, N | + | [[Category: Nakagawa, N]] |
| - | [[Category: Nakamura, Y | + | [[Category: Nakamura, Y]] |
| - | [[Category: | + | [[Category: Structural genomic]] |
| - | [[Category: Yokoyama, S | + | [[Category: Yokoyama, S]] |
| - | [[Category: | + | [[Category: Hydrolase]] |
| - | [[Category: | + | [[Category: Magnesium]] |
| - | [[Category: | + | [[Category: National project on protein structural and functional analyse]] |
| - | + | [[Category: Nppsfa]] | |
| - | [[Category: | + | [[Category: Rsgi]] |
| - | [[Category: | + | [[Category: Uncharacterized conserved protein]] |
| - | [[Category: | + | |
| - | + | ||
| - | + | ||
| - | + | ||
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Current revision
Crystal structure of uncharacterized conserved protein from Thermotoga maritima
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Categories: 2-phosphosulfolactate phosphatase | Large Structures | Thema | Bessho, Y | Kuramitsu, S | Nakagawa, N | Nakamura, Y | Structural genomic | Yokoyama, S | Hydrolase | Magnesium | National project on protein structural and functional analyse | Nppsfa | Rsgi | Uncharacterized conserved protein
