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2yzo
From Proteopedia
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==Crystal structure of uncharacterized conserved protein from Thermotoga maritima== | ==Crystal structure of uncharacterized conserved protein from Thermotoga maritima== | ||
| - | <StructureSection load='2yzo' size='340' side='right' caption='[[2yzo]], [[Resolution|resolution]] 1.85Å' scene=''> | + | <StructureSection load='2yzo' size='340' side='right'caption='[[2yzo]], [[Resolution|resolution]] 1.85Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2yzo]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2yzo]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thema Thema]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YZO FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MLT:D-MALATE'>MLT</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MLT:D-MALATE'>MLT</scene></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">comB ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">comB ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243274 THEMA])</td></tr> |
| - | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/2-phosphosulfolactate_phosphatase 2-phosphosulfolactate phosphatase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.3.71 3.1.3.71] </span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yzo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yzo OCA], [https://pdbe.org/2yzo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yzo RCSB], [https://www.ebi.ac.uk/pdbsum/2yzo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yzo ProSAT], [https://www.topsan.org/Proteins/RSGI/2yzo TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yz/2yzo_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yz/2yzo_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2yzo ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: 2-phosphosulfolactate phosphatase]] | [[Category: 2-phosphosulfolactate phosphatase]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Bessho, Y | + | [[Category: Thema]] |
| - | [[Category: Kuramitsu, S | + | [[Category: Bessho, Y]] |
| - | [[Category: Nakagawa, N | + | [[Category: Kuramitsu, S]] |
| - | [[Category: Nakamura, Y | + | [[Category: Nakagawa, N]] |
| - | [[Category: | + | [[Category: Nakamura, Y]] |
| - | [[Category: Yokoyama, S | + | [[Category: Structural genomic]] |
| + | [[Category: Yokoyama, S]] | ||
[[Category: Hydrolase]] | [[Category: Hydrolase]] | ||
[[Category: Magnesium]] | [[Category: Magnesium]] | ||
[[Category: National project on protein structural and functional analyse]] | [[Category: National project on protein structural and functional analyse]] | ||
[[Category: Nppsfa]] | [[Category: Nppsfa]] | ||
| - | [[Category: Riken structural genomics/proteomics initiative]] | ||
[[Category: Rsgi]] | [[Category: Rsgi]] | ||
| - | [[Category: Structural genomic]] | ||
[[Category: Uncharacterized conserved protein]] | [[Category: Uncharacterized conserved protein]] | ||
Current revision
Crystal structure of uncharacterized conserved protein from Thermotoga maritima
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Categories: 2-phosphosulfolactate phosphatase | Large Structures | Thema | Bessho, Y | Kuramitsu, S | Nakagawa, N | Nakamura, Y | Structural genomic | Yokoyama, S | Hydrolase | Magnesium | National project on protein structural and functional analyse | Nppsfa | Rsgi | Uncharacterized conserved protein
