This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2zbw
From Proteopedia
(Difference between revisions)
| (12 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2zbw.jpg|left|200px]]<br /><applet load="2zbw" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2zbw, resolution 2.10Å" /> | ||
| - | '''Crystal structure of thioredoxin reductase-like protein from Thermus thermophilus HB8'''<br /> | ||
| - | == | + | ==Crystal structure of thioredoxin reductase-like protein from Thermus thermophilus HB8== |
| - | + | <StructureSection load='2zbw' size='340' side='right'caption='[[2zbw]], [[Resolution|resolution]] 2.10Å' scene=''> | |
| - | [ | + | == Structural highlights == |
| - | [[ | + | <table><tr><td colspan='2'>[[2zbw]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZBW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZBW FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr> |
| - | [ | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zbw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zbw OCA], [https://pdbe.org/2zbw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zbw RCSB], [https://www.ebi.ac.uk/pdbsum/2zbw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zbw ProSAT], [https://www.topsan.org/Proteins/RSGI/2zbw TOPSAN]</span></td></tr> |
| - | [ | + | </table> |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | + | Check<jmol> | |
| - | + | <jmolCheckbox> | |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zb/2zbw_consurf.spt"</scriptWhenChecked> | |
| - | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |
| - | [[ | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | + | </jmolCheckbox> | |
| - | [ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2zbw ConSurf]. |
| - | [[ | + | <div style="clear:both"></div> |
| - | + | ||
| - | + | ==See Also== | |
| + | *[[Thioredoxin reductase 3D structures|Thioredoxin reductase 3D structures]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Thet8]] | ||
| + | [[Category: Ebihara, A]] | ||
| + | [[Category: Fujimoto, Y]] | ||
| + | [[Category: Kitamura, Y]] | ||
| + | [[Category: Kuramitsu, S]] | ||
| + | [[Category: Manzoku, M]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Yokoyama, S]] | ||
| + | [[Category: National project on protein structural and functional analyse]] | ||
| + | [[Category: Nppsfa]] | ||
| + | [[Category: Oxidoreductase]] | ||
| + | [[Category: Redox protein]] | ||
| + | [[Category: Rsgi]] | ||
Current revision
Crystal structure of thioredoxin reductase-like protein from Thermus thermophilus HB8
| |||||||||||
