1fyf

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[[Image:1fyf.gif|left|200px]]
[[Image:1fyf.gif|left|200px]]
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{{Structure
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<!--
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|PDB= 1fyf |SIZE=350|CAPTION= <scene name='initialview01'>1fyf</scene>, resolution 1.65&Aring;
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The line below this paragraph, containing "STRUCTURE_1fyf", creates the "Structure Box" on the page.
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|SITE=
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=SSA:5&#39;-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE'>SSA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Threonine--tRNA_ligase Threonine--tRNA ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.1.1.3 6.1.1.3] </span>
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or leave the SCENE parameter empty for the default display.
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|GENE=
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-->
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|DOMAIN=
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{{STRUCTURE_1fyf| PDB=1fyf | SCENE= }}
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|RELATEDENTRY=[[1qf6|1QF6]], [[1evk|1EVK]], [[1evl|1EVL]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1fyf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1fyf OCA], [http://www.ebi.ac.uk/pdbsum/1fyf PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1fyf RCSB]</span>
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}}
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'''CRYSTAL STRUCTURE OF A TRUNCATED FORM OF THREONYL-TRNA SYNTHETASE COMPLEXED WITH A SERYL ADENYLATE ANALOG'''
'''CRYSTAL STRUCTURE OF A TRUNCATED FORM OF THREONYL-TRNA SYNTHETASE COMPLEXED WITH A SERYL ADENYLATE ANALOG'''
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[[Category: Moras, D.]]
[[Category: Moras, D.]]
[[Category: Sankaranarayanan, R.]]
[[Category: Sankaranarayanan, R.]]
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[[Category: adenylate analog]]
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[[Category: Adenylate analog]]
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[[Category: amino acid recognition]]
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[[Category: Amino acid recognition]]
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[[Category: deletion mutant]]
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[[Category: Deletion mutant]]
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[[Category: trna-synthetase]]
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[[Category: Trna-synthetase]]
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[[Category: zinc ion]]
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[[Category: Zinc ion]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 16:54:20 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 20:32:46 2008''
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Revision as of 13:54, 2 May 2008

Template:STRUCTURE 1fyf

CRYSTAL STRUCTURE OF A TRUNCATED FORM OF THREONYL-TRNA SYNTHETASE COMPLEXED WITH A SERYL ADENYLATE ANALOG


Overview

Threonyl-tRNA synthetase, a class II synthetase, uses a unique zinc ion to discriminate against the isosteric valine at the activation step. The crystal structure of the enzyme with an analog of seryl adenylate shows that the noncognate serine cannot be fully discriminated at that step. We show that hydrolysis of the incorrectly formed ser-tRNA(Thr) is performed at a specific site in the N-terminal domain of the enzyme. The present study suggests that both classes of synthetases use effectively the ability of the CCA end of tRNA to switch between a hairpin and a helical conformation for aminoacylation and editing. As a consequence, the editing mechanism of both classes of synthetases can be described as mirror images, as already seen for tRNA binding and amino acid activation.

About this Structure

1FYF is a Single protein structure of sequence from Escherichia coli. Full crystallographic information is available from OCA.

Reference

Transfer RNA-mediated editing in threonyl-tRNA synthetase. The class II solution to the double discrimination problem., Dock-Bregeon A, Sankaranarayanan R, Romby P, Caillet J, Springer M, Rees B, Francklyn CS, Ehresmann C, Moras D, Cell. 2000 Dec 8;103(6):877-84. PMID:11136973 Page seeded by OCA on Fri May 2 16:54:20 2008

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