This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2ffn

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (16:04, 22 December 2021) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
 +
==The E41Q mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F==
==The E41Q mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F==
-
<StructureSection load='2ffn' size='340' side='right' caption='[[2ffn]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
+
<StructureSection load='2ffn' size='340' side='right'caption='[[2ffn]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2ffn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desvm Desvm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FFN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FFN FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2ffn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Desvm Desvm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FFN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FFN FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ffn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ffn OCA], [http://pdbe.org/2ffn PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ffn RCSB], [http://www.ebi.ac.uk/pdbsum/2ffn PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ffn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ffn OCA], [https://pdbe.org/2ffn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ffn RCSB], [https://www.ebi.ac.uk/pdbsum/2ffn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ffn ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/CYC3_DESVM CYC3_DESVM]] Participates in sulfate respiration coupled with phosphorylation by transferring electrons from the enzyme dehydrogenase to ferredoxin.
+
[[https://www.uniprot.org/uniprot/CYC3_DESVM CYC3_DESVM]] Participates in sulfate respiration coupled with phosphorylation by transferring electrons from the enzyme dehydrogenase to ferredoxin.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ff/2ffn_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ff/2ffn_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 20: Line 21:
==See Also==
==See Also==
-
*[[Cytochrome c|Cytochrome c]]
+
*[[Cytochrome C 3D structures|Cytochrome C 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Desvm]]
[[Category: Desvm]]
 +
[[Category: Large Structures]]
[[Category: Higuchi, Y]]
[[Category: Higuchi, Y]]
[[Category: Komori, H]]
[[Category: Komori, H]]

Current revision

The E41Q mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F

PDB ID 2ffn

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools