This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2g7z

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:41, 29 December 2021) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2g7z.gif|left|200px]]
 
-
{{Structure
+
==Conserved DegV-like Protein of Unknown Function from Streptococcus pyogenes M1 GAS Binds Long-chain Fatty Acids==
-
|PDB= 2g7z |SIZE=350|CAPTION= <scene name='initialview01'>2g7z</scene>, resolution 2.05&Aring;
+
<StructureSection load='2g7z' size='340' side='right'caption='[[2g7z]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=HXA:DOCOSA-4,7,10,13,16,19-HEXAENOIC+ACID'>HXA</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene> and <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>
+
<table><tr><td colspan='2'>[[2g7z]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pyogenes_(serotype_1_/_m1_gas) Streptococcus pyogenes (serotype 1 / m1 gas)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G7Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2G7Z FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HXA:DOCOSA-4,7,10,13,16,19-HEXAENOIC+ACID'>HXA</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
|GENE=
+
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
}}
+
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1mgp|1mgp]]</div></td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2g7z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g7z OCA], [https://pdbe.org/2g7z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2g7z RCSB], [https://www.ebi.ac.uk/pdbsum/2g7z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2g7z ProSAT], [https://www.topsan.org/Proteins/MCSG/2g7z TOPSAN]</span></td></tr>
-
'''Conserved DegV-like Protein of Unknown Function from Streptococcus pyogenes M1 GAS Binds Long-chain Fatty Acids'''
+
</table>
-
 
+
== Function ==
-
 
+
[[https://www.uniprot.org/uniprot/Y1493_STRP1 Y1493_STRP1]] Binds long-chain fatty acids, such as palmitate, and may play a role in lipid transport or fatty acid metabolism.
-
==About this Structure==
+
== Evolutionary Conservation ==
-
2G7Z is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_pyogenes_mgas8232 Streptococcus pyogenes mgas8232]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G7Z OCA].
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Single protein]]
+
Check<jmol>
-
[[Category: Streptococcus pyogenes mgas8232]]
+
<jmolCheckbox>
-
[[Category: Clancy, S.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g7/2g7z_consurf.spt"</scriptWhenChecked>
-
[[Category: Joachimiak, A.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Nocek, B.]]
+
</jmolCheckbox>
-
[[Category: Volkart, L.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2g7z ConSurf].
-
[[Category: CL]]
+
<div style="clear:both"></div>
-
[[Category: GOL]]
+
__TOC__
-
[[Category: HXA]]
+
</StructureSection>
-
[[Category: TRS]]
+
[[Category: Large Structures]]
-
[[Category: ZN]]
+
[[Category: Clancy, S]]
-
[[Category: hypothetical protein]]
+
[[Category: Joachimiak, A]]
-
[[Category: lipid binding protein]]
+
[[Category: Structural genomic]]
-
[[Category: long-fatty acid binding protein]]
+
[[Category: Nocek, B]]
-
[[Category: mcsg]]
+
[[Category: Volkart, L]]
-
[[Category: midwest center for structural genomic]]
+
[[Category: Hypothetical protein]]
-
[[Category: protein structure initiative]]
+
[[Category: Lipid binding protein]]
-
[[Category: psi]]
+
[[Category: Long-fatty acid binding protein]]
-
[[Category: structural genomic]]
+
[[Category: Mcsg]]
-
 
+
[[Category: PSI, Protein structure initiative]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 17:01:31 2008''
+
[[Category: Unknown function]]

Current revision

Conserved DegV-like Protein of Unknown Function from Streptococcus pyogenes M1 GAS Binds Long-chain Fatty Acids

PDB ID 2g7z

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools