This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2g9d
From Proteopedia
(Difference between revisions)
| (13 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2g9d.gif|left|200px]] | ||
| - | + | ==Crystal Structure of Succinylglutamate desuccinylase from Vibrio cholerae, Northeast Structural Genomics Target VcR20== | |
| - | + | <StructureSection load='2g9d' size='340' side='right'caption='[[2g9d]], [[Resolution|resolution]] 3.00Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2g9d]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibco Vibco]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G9D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2G9D FirstGlance]. <br> | |
| - | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2g9d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g9d OCA], [https://pdbe.org/2g9d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2g9d RCSB], [https://www.ebi.ac.uk/pdbsum/2g9d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2g9d ProSAT], [https://www.topsan.org/Proteins/NESGC/2g9d TOPSAN]</span></td></tr> | |
| - | + | </table> | |
| - | + | == Function == | |
| - | + | [[https://www.uniprot.org/uniprot/ASTE_VIBCH ASTE_VIBCH]] Transforms N(2)-succinylglutamate into succinate and glutamate (By similarity). | |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | == | + | Check<jmol> |
| - | + | <jmolCheckbox> | |
| - | [[ | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g9/2g9d_consurf.spt"</scriptWhenChecked> |
| - | [[Category: | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: Acton, T B | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: Conover, K | + | </jmolCheckbox> |
| - | [[Category: Forouhar, F | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2g9d ConSurf]. |
| - | [[Category: Hunt, J F | + | <div style="clear:both"></div> |
| - | [[Category: Jayaraman, S | + | __TOC__ |
| - | [[Category: Montelione, G T | + | </StructureSection> |
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Rong, X | + | [[Category: Vibco]] |
| - | [[Category: Tong, L | + | [[Category: Acton, T B]] |
| - | [[Category: Zhou, W | + | [[Category: Conover, K]] |
| - | [[Category: | + | [[Category: Forouhar, F]] |
| - | [[Category: | + | [[Category: Hunt, J F]] |
| - | [[Category: | + | [[Category: Jayaraman, S]] |
| - | [[Category: | + | [[Category: Montelione, G T]] |
| - | + | [[Category: Structural genomic]] | |
| - | + | [[Category: Rong, X]] | |
| - | + | [[Category: Tong, L]] | |
| - | + | [[Category: Zhou, W]] | |
| + | [[Category: Alpha-beta protein]] | ||
| + | [[Category: Hydrolase]] | ||
| + | [[Category: Nesg]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
Current revision
Crystal Structure of Succinylglutamate desuccinylase from Vibrio cholerae, Northeast Structural Genomics Target VcR20
| |||||||||||
