This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2ggo

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:44, 29 December 2021) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2ggo.gif|left|200px]]
 
-
{{Structure
+
==Crystal Structure of glucose-1-phosphate thymidylyltransferase from Sulfolobus tokodaii==
-
|PDB= 2ggo |SIZE=350|CAPTION= <scene name='initialview01'>2ggo</scene>, resolution 1.80&Aring;
+
<StructureSection load='2ggo' size='340' side='right'caption='[[2ggo]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND=
+
<table><tr><td colspan='2'>[[2ggo]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/(in_press)_sulfurisphaera_tokodaii (in press) sulfurisphaera tokodaii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GGO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GGO FirstGlance]. <br>
-
|ACTIVITY= [http://en.wikipedia.org/wiki/Glucose-1-phosphate_thymidylyltransferase Glucose-1-phosphate thymidylyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.24 2.7.7.24]
+
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2ggq|2ggq]]</div></td></tr>
-
|GENE=
+
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Glucose-1-phosphate_thymidylyltransferase Glucose-1-phosphate thymidylyltransferase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.24 2.7.7.24] </span></td></tr>
-
}}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ggo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ggo OCA], [https://pdbe.org/2ggo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ggo RCSB], [https://www.ebi.ac.uk/pdbsum/2ggo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ggo ProSAT]</span></td></tr>
-
 
+
</table>
-
'''Crystal Structure of glucose-1-phosphate thymidylyltransferase from Sulfolobus tokodaii'''
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
==About this Structure==
+
<jmolCheckbox>
-
2GGO is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Sulfolobus_tokodaii Sulfolobus tokodaii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GGO OCA].
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gg/2ggo_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ggo ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Glucose-1-phosphate thymidylyltransferase]]
[[Category: Glucose-1-phosphate thymidylyltransferase]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Sulfolobus tokodaii]]
+
[[Category: Kuramitsu, S]]
-
[[Category: Kuramitsu, S.]]
+
[[Category: Masui, R]]
-
[[Category: Masui, R.]]
+
[[Category: Mizushima, T]]
-
[[Category: Mizushima, T.]]
+
[[Category: Rajakannan, V]]
-
[[Category: Rajakannan, V.]]
+
[[Category: Suzuki, A]]
-
[[Category: Suzuki, A.]]
+
[[Category: Yamane, T]]
-
[[Category: Yamane, T.]]
+
[[Category: Beta barrel]]
-
[[Category: beta barrel]]
+
[[Category: Transferase]]
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 17:04:30 2008''
+

Current revision

Crystal Structure of glucose-1-phosphate thymidylyltransferase from Sulfolobus tokodaii

PDB ID 2ggo

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools