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2gup

From Proteopedia

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[[Image:2gup.gif|left|200px]]
 
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{{Structure
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==Structural Genomics, the crystal structure of a ROK family protein from Streptococcus pneumoniae TIGR4 in complex with sucrose==
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|PDB= 2gup |SIZE=350|CAPTION= <scene name='initialview01'>2gup</scene>, resolution 2.01&Aring;
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<StructureSection load='2gup' size='340' side='right'caption='[[2gup]], [[Resolution|resolution]] 2.01&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SUC:SUCROSE'>SUC</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene>
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<table><tr><td colspan='2'>[[2gup]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Strpn Strpn]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GUP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GUP FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene>, <scene name='pdbligand=FRU:FRUCTOSE'>FRU</scene></td></tr>
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|GENE=
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1940 NagC], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00480 ROK]</span>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gup FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gup OCA], [https://pdbe.org/2gup PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gup RCSB], [https://www.ebi.ac.uk/pdbsum/2gup PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gup ProSAT], [https://www.topsan.org/Proteins/MCSG/2gup TOPSAN]</span></td></tr>
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|RELATEDENTRY=
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</table>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gup FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gup OCA], [http://www.ebi.ac.uk/pdbsum/2gup PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2gup RCSB]</span>
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== Evolutionary Conservation ==
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}}
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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'''Structural Genomics, the crystal structure of a ROK family protein from Streptococcus pneumoniae TIGR4 in complex with sucrose'''
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gu/2gup_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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==About this Structure==
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<text>to colour the structure by Evolutionary Conservation</text>
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2GUP is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_pneumoniae Streptococcus pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GUP OCA].
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</jmolCheckbox>
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[[Category: Single protein]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gup ConSurf].
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[[Category: Streptococcus pneumoniae]]
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<div style="clear:both"></div>
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[[Category: Abdullah, J.]]
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__TOC__
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[[Category: Joachimiak, A.]]
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</StructureSection>
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[[Category: Li, H.]]
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[[Category: Large Structures]]
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[[Category: MCSG, Midwest Center for Structural Genomics.]]
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[[Category: Strpn]]
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[[Category: Tan, K.]]
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[[Category: Abdullah, J]]
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[[Category: apc80695]]
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[[Category: Joachimiak, A]]
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[[Category: mcsg]]
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[[Category: Li, H]]
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[[Category: midwest center for structural genomic]]
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[[Category: Structural genomic]]
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[[Category: protein structure initiative]]
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[[Category: Tan, K]]
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[[Category: psi]]
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[[Category: Apc80695]]
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[[Category: rok family]]
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[[Category: Mcsg]]
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[[Category: streptococcus pneumoniae tigr4]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: structural genomic]]
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[[Category: Rok family]]
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[[Category: sucrose]]
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[[Category: Streptococcus pneumoniae tigr4]]
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[[Category: sugar kinase]]
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[[Category: Sucrose]]
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[[Category: Sugar kinase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:21:50 2008''
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[[Category: Transferase]]

Current revision

Structural Genomics, the crystal structure of a ROK family protein from Streptococcus pneumoniae TIGR4 in complex with sucrose

PDB ID 2gup

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