This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3b8b

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:27, 5 January 2022) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3b8b.jpg|left|200px]]
 
-
{{Structure
+
==Crystal structure of CysQ from Bacteroides thetaiotaomicron, a bacterial member of the inositol monophosphatase family==
-
|PDB= 3b8b |SIZE=350|CAPTION= <scene name='initialview01'>3b8b</scene>, resolution 1.700&Aring;
+
<StructureSection load='3b8b' size='340' side='right'caption='[[3b8b]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene> and <scene name='pdbligand=CL:CHLORIDE ION'>CL</scene>
+
<table><tr><td colspan='2'>[[3b8b]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bactn Bactn]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3B8B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3B8B FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
|GENE= cysQ, BT_0411 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2 Bacteria])
+
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
}}
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">cysQ, BT_0411 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=226186 BACTN])</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3b8b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3b8b OCA], [https://pdbe.org/3b8b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3b8b RCSB], [https://www.ebi.ac.uk/pdbsum/3b8b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3b8b ProSAT], [https://www.topsan.org/Proteins/MCSG/3b8b TOPSAN]</span></td></tr>
-
'''Crystal structure of CysQ from Bacteroides thetaiotaomicron, a bacterial member of the inositol monophosphatase family'''
+
</table>
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
3B8B is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacteria Bacteria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3B8B OCA].
+
<jmolCheckbox>
-
[[Category: Bacteria]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/b8/3b8b_consurf.spt"</scriptWhenChecked>
-
[[Category: Single protein]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Abdullah, J.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Cuff, M E.]]
+
</jmolCheckbox>
-
[[Category: Joachimiak, A.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3b8b ConSurf].
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
<div style="clear:both"></div>
-
[[Category: Mulligan, R.]]
+
__TOC__
-
[[Category: CL]]
+
</StructureSection>
-
[[Category: SO4]]
+
[[Category: Bactn]]
-
[[Category: 3'-phosphoadenosine-5'-phosphosulfate (paps) 3'-phosphatase]]
+
[[Category: Large Structures]]
-
[[Category: cysq]]
+
[[Category: Abdullah, J]]
-
[[Category: hydrolase]]
+
[[Category: Cuff, M E]]
-
[[Category: mcsg]]
+
[[Category: Joachimiak, A]]
-
[[Category: midwest center for structural genomic]]
+
[[Category: Structural genomic]]
-
[[Category: protein structure initiative]]
+
[[Category: Mulligan, R]]
-
[[Category: psi-2]]
+
[[Category: Cysq]]
-
[[Category: structural genomic]]
+
[[Category: Hydrolase]]
-
[[Category: sulfite synthesis pathway]]
+
[[Category: Mcsg]]
-
 
+
[[Category: PSI, Protein structure initiative]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:57:00 2008''
+
[[Category: Sulfite synthesis pathway]]

Current revision

Crystal structure of CysQ from Bacteroides thetaiotaomicron, a bacterial member of the inositol monophosphatase family

PDB ID 3b8b

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3b8b"
Personal tools